RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 GBAP04062 536 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 PDGFRAP16234 1089 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 PTPN3P26045 913 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 TNFRSF8P28908 595 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 CDC25CP30307 473 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 LHX1P48742 406 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 THBS3P49746 956 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 ASCL1P50553 236 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 BMXP51813 675 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 CAPZA1P52907 286 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 MDH1BQ5I0G3 518 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 ARHGAP24Q8N264 748 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 MUC20Q8N307 709 aaPredicted RBP5.62□□□□□ -1.51
VPS50-212ENST00000476413 ANKRD13CQ8N6S4 541 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 FGFBP3Q8TAT2 258 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 RNF128Q8TEB7 428 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 SORCS1Q8WY21 1168 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 ZBTB9Q96C00 473 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 ABHD8Q96I13 439 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 FNBP1Q96RU3 617 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 EGFL8Q99944 293 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 TM6SF1Q9BZW5 370 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 XAB2Q9HCS7 855 aaKnown RBP5.62□□□□□ -1.51
VPS50-212ENST00000476413 ABCF3Q9NUQ8 709 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 A0A1W2PPK0 400 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 ARHGEF37A1IGU5 675 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 PRR32B1ATL7 298 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 PDE9AO76083 593 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 IGHV2-70P01814 119 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 H1F0P07305 194 aaKnown RBP5.61□□□□□ -1.51
VPS50-212ENST00000476413 CSN3P07498 182 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 FAM58BPP0C7Q3 252 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 ZNF23P17027 643 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 CRKLP46109 303 aaKnown RBP5.61□□□□□ -1.51
VPS50-212ENST00000476413 THOP1P52888 689 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 MAPK12P53778 367 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 MLLT10P55197 1068 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 ILF3Q12906 894 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS50-212ENST00000476413 MFAP5Q13361 173 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 KIF19Q2TAC6 998 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 SYT14P1Q58G82 188 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 MFSD12Q6NUT3 480 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 PACS1Q6VY07 963 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 FAM219AQ8IW50 185 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 Q8N9P0 234 aaPredicted RBP5.61□□□□□ -1.51
VPS50-212ENST00000476413 TRIML1Q8N9V2 468 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 OR13J1Q8NGT2 312 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 SSMEM1Q8WWF3 244 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 KCNE4Q8WWG9 221 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 MOB3AQ96BX8 217 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 VMP1Q96GC9 406 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 C17orf77Q96MU5 243 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 DDX31Q9H8H2 851 aaKnown RBP5.61□□□□□ -1.51
VPS50-212ENST00000476413 CD93Q9NPY3 652 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 ZNF701Q9NV72 531 aaPredicted RBP5.61□□□□□ -1.51
VPS50-212ENST00000476413 B3GAT1Q9P2W7 334 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 MTUS1Q9ULD2 1270 aa5.61□□□□□ -1.51
VPS50-212ENST00000476413 PCDH11YQ9BZA8 1340 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 SAA2-SAA4A0A096LPE2 208 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 MED19A0JLT2 244 aaPredicted RBP5.6□□□□□ -1.51
VPS50-212ENST00000476413 HTR3EA5X5Y0 456 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 ASPDHA6ND91 283 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 FAM86B1E9PN63 330 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 WDR46O15213 610 aaKnown RBP5.6□□□□□ -1.51
VPS50-212ENST00000476413 AP5Z1O43299 807 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 BAG4O95429 457 aaKnown RBP5.6□□□□□ -1.51
VPS50-212ENST00000476413 FAM86B2P0C5J1 330 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 SMIM18P0DKX4 95 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 CKMT2P17540 419 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 NAGLUP54802 743 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 UBASH3AP57075 661 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 TUBB4BP68371 445 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 ASIC2Q16515 512 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 DUOXA1Q1HG43 343 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 NUP54Q7Z3B4 507 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 DSG4Q86SJ6 1040 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 LONP2Q86WA8 852 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 COMMD2Q86X83 199 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 RDM1Q8NG50 284 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 OLIG1Q8TAK6 271 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 SYN2Q92777 582 aaPredicted RBP5.6□□□□□ -1.51
VPS50-212ENST00000476413 DHX58Q96C10 678 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 ERO1AQ96HE7 468 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 ZPBPQ9BS86 351 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 C2orf40Q9H1Z8 148 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 PELI2Q9HAT8 420 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 SERINC1Q9NRX5 453 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 POLLQ9UGP5 575 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 RASAL2Q9UJF2 1139 aa5.6□□□□□ -1.51
VPS50-212ENST00000476413 CPSF3Q9UKF6 684 aaKnown RBP5.6□□□□□ -1.51
VPS50-212ENST00000476413 PAPSS2O95340 614 aaPredicted RBP5.59□□□□□ -1.51
VPS50-212ENST00000476413 SLU7O95391 586 aaKnown RBP5.59□□□□□ -1.51
VPS50-212ENST00000476413 TCEA1P23193 301 aaKnown RBP5.59□□□□□ -1.51
VPS50-212ENST00000476413 EEF1B2P24534 225 aaKnown RBP5.59□□□□□ -1.51
VPS50-212ENST00000476413 PTGER4P35408 488 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 ART1P52961 327 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 MBTD1Q05BQ5 628 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 SLC39A14Q15043 492 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 E2F5Q15329 346 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 FAM91A1Q658Y4 838 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms