RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 MLXIPLQ9NP71 852 aa5.29□□□□□ -1.56
SSR3-206ENST00000476217 RAB21Q9UL25 225 aa5.29□□□□□ -1.56
SSR3-206ENST00000476217 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.29□□□□□ -1.56
SSR3-206ENST00000476217 ALG6Q9Y672 507 aa5.29□□□□□ -1.56
SSR3-206ENST00000476217 COPG1Q9Y678 874 aaKnown RBP5.29□□□□□ -1.56
SSR3-206ENST00000476217 PATJQ8NI35 1801 aa5.29□□□□□ -1.56
SSR3-206ENST00000476217 VWA8A3KMH1 1905 aa5.29□□□□□ -1.56
SSR3-206ENST00000476217 NLRC5Q86WI3 1866 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 KIAA0100Q14667 2235 aaKnown RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 MYH10P35580 1976 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 KIR2DS5A0A0G2JLQ3 304 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SIGLEC16A6NMB1 481 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 F8VP50 259 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 KIR2DS3K7RE56 304 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 TRIM38O00635 465 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 CAPN9O14815 690 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 PAPSS1O43252 624 aaPredicted RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 TLX3O43711 291 aaPredicted RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 CEP104O60308 925 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 HSF2BPO75031 334 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 TULP3O75386 442 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 CSPG5O95196 566 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SLU7O95391 586 aaKnown RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 ALDOCP09972 364 aaKnown RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 PDGFRAP16234 1089 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 CYP2F1P24903 491 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 CTNNA2P26232 953 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SERPINA4P29622 427 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SDC4P31431 198 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 OR1D2P34982 312 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 RFC1P35251 1148 aaPredicted RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 PAFAH1B1P43034 410 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 NR4A2P43354 598 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 RWDD2BP57060 319 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SMARCB1Q12824 385 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SMC1AQ14683 1233 aaKnown RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 CDO1Q16878 200 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 CFAP221Q4G0U5 840 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 EFHC1Q5JVL4 640 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SEL1L2Q5TEA6 688 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 DAB2IPQ5VWQ8 1189 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 DGAT2L7PQ6IED9 249 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SLC26A9Q7LBE3 791 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 TMEM110Q86TL2 294 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 PIM3Q86V86 326 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 CCDC50Q8IVM0 306 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 VPS52Q8N1B4 723 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 CEP112Q8N8E3 955 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 NIPA2Q8N8Q9 360 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 ARL14EPQ8N8R7 260 aaPredicted RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 OR6Y1Q8NGX8 325 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 PHOSPHO2Q8TCD6 241 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 STT3BQ8TCJ2 826 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SPPL2BQ8TCT7 592 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 CLEC4CQ8WTT0 213 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 UBE2Q2Q8WVN8 375 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 HES6Q96HZ4 224 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 PIWIL1Q96J94 861 aaKnown RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 KCNK16Q96T55 309 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 RAD9AQ99638 391 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SEPT5Q99719 369 aaPredicted RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 CNPY3Q9BT09 278 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 CARD6Q9BX69 1037 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 ULBP1Q9BZM6 244 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SPRTNQ9H040 489 aaPredicted RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 CSNK1G1Q9HCP0 422 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 SAYSD1Q9NPB0 183 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 MRPL17Q9NRX2 175 aaKnown RBP5.28□□□□□ -1.56
SSR3-206ENST00000476217 POT1Q9NUX5 634 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 MTRRQ9UBK8 725 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 STK39Q9UEW8 545 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 DAPP1Q9UN19 280 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 PTPRDP23468 1912 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 MYO16Q9Y6X6 1858 aa5.28□□□□□ -1.56
SSR3-206ENST00000476217 CACNA1IQ9P0X4 2223 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 LY6G6EA0A0G2JKS1 128 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 GOLGA6L10A0A0M3HER8 536 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 CTAGE15A4D2H0 777 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 MTMR11A4FU01 709 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 HHLA1C9JL84 531 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 MCIDASD6RGH6 385 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 M0QYT0 321 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 PGRMC1O00264 195 aaKnown RBP5.27□□□□□ -1.57
SSR3-206ENST00000476217 PRRG1O14668 218 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 ADAM10O14672 748 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 PSTPIP1O43586 416 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 DAB1O75553 588 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 KAT7O95251 611 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 CTAGE8P0CG41 777 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 PRF1P14222 555 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 PRLRP16471 622 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 CTNNA1P35221 906 aaKnown RBP5.27□□□□□ -1.57
SSR3-206ENST00000476217 CETN2P41208 172 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 MAGEA11P43364 429 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 MARCKSL1P49006 195 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 RPL34P49207 117 aaKnown RBP5.27□□□□□ -1.57
SSR3-206ENST00000476217 SULT1E1P49888 294 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 ADPRHP54922 357 aa5.27□□□□□ -1.57
SSR3-206ENST00000476217 RPL10AP62906 217 aaKnown RBP5.27□□□□□ -1.57
SSR3-206ENST00000476217 YWHAZP63104 245 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms