RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 H3BSH0 61 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 WFS1O76024 890 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 ALPIP09923 528 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 NSG1P42857 185 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 SLC1A2P43004 574 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 GRK6P43250 576 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 C5orf22Q49AR2 442 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 SPRYD7Q5W111 196 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 TMEM214Q6NUQ4 689 aaKnown RBP10.79□□□□□ -0.68
VAPB-204ENST00000475243 GALNT7Q86SF2 657 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 SLC51AQ86UW1 340 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 SLC22A15Q8IZD6 547 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 PGAM4Q8N0Y7 254 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 FAM13CQ8NE31 585 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 SLC38A4Q969I6 547 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 HCN3Q9P1Z3 774 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 MYH13Q9UKX3 1938 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 PLIN3O60664 434 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 CYP3A5P20815 502 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 NCBP2P52298 156 aaKnown RBP eCLIP10.79□□□□□ -0.686e-6■■□□□ 11.7
VAPB-204ENST00000475243 DGKEP52429 567 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 TEAD4Q15561 434 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 THAP5Q7Z6K1 395 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 RANBP3LQ86VV4 465 aaPredicted RBP10.79□□□□□ -0.68
VAPB-204ENST00000475243 ZDHHC21Q8IVQ6 265 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 TTC29Q8NA56 475 aaPredicted RBP10.79□□□□□ -0.68
VAPB-204ENST00000475243 OR13C4Q8NGS5 318 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 IL36AQ9UHA7 158 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 GLTPD2A6NH11 291 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 CPN2P22792 545 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 ALDH3A2P51648 485 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 CHAF1BQ13112 559 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 TAF1AQ15573 450 aaPredicted RBP10.79□□□□□ -0.68
VAPB-204ENST00000475243 PLET1Q6UQ28 207 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 AKAP14Q86UN6 197 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 FITM2Q8N6M3 262 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 OR5M3Q8NGP4 307 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 TNFRSF25Q93038 417 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 B4DGG1 531 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 CCDC54Q8NEL0 328 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 PCDH19Q8TAB3 1148 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 DHRS1Q96LJ7 313 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 MALT1Q9UDY8 824 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 RGS17Q9UGC6 210 aaPredicted RBP10.79□□□□□ -0.68
VAPB-204ENST00000475243 GADD45GO95257 159 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 SDC2P34741 201 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 PPP3R1P63098 170 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 GAD2Q05329 585 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 TARDBPQ13148 414 aaKnown RBP eCLIP10.79□□□□□ -0.683e-7■■■■□ 25.5
VAPB-204ENST00000475243 PUM1Q14671 1186 aaKnown RBP eCLIP10.79□□□□□ -0.684e-7■□□□□ 9.7
VAPB-204ENST00000475243 CA9Q16790 459 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 CYP2U1Q7Z449 544 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 ARMC10Q8N2F6 343 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 RIMKLBQ9ULI2 386 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 EOMESO95936 686 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 C8GP07360 202 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 ZNF823P16415 610 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 CLEC12AQ5QGZ9 265 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 RNF220Q5VTB9 566 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 ZCCHC12Q6PEW1 402 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 HM13Q8TCT9 377 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 SH3RF2Q8TEC5 729 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 SLC25A36Q96CQ1 311 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 SPATA9Q9BWV2 254 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 MCCC2Q9HCC0 563 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 IFT46Q9NQC8 304 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 DTLQ9NZJ0 730 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 NIPSNAP2O75323 286 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 LCA5LO95447 670 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 ACP5P13686 325 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 FCHO2Q0JRZ9 810 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 NFATC2Q13469 925 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 USP30Q70CQ3 517 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 TNFAIP8L1Q8WVP5 186 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 TRIM2Q9C040 744 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 STOML2Q9UJZ1 356 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 CCNB2O95067 398 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 NFKB2Q00653 900 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 OC90Q02509 493 aaPredicted RBP10.78□□□□□ -0.68
VAPB-204ENST00000475243 LRRC32Q14392 662 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 SWI5Q1ZZU3 235 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 SLC35G5Q96KT7 338 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 TVP23BQ9NYZ1 205 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 CSN2P05814 226 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 RPS9P46781 194 aaKnown RBP10.78□□□□□ -0.68
VAPB-204ENST00000475243 GPR68Q15743 365 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 GRHL3Q8TE85 626 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 GPN1Q9HCN4 374 aaPredicted RBP10.78□□□□□ -0.68
VAPB-204ENST00000475243 POLMQ9NP87 494 aaPredicted RBP10.78□□□□□ -0.68
VAPB-204ENST00000475243 SMPD3Q9NY59 655 aaPredicted RBP10.78□□□□□ -0.68
VAPB-204ENST00000475243 MARK1Q9P0L2 795 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 CPED1A4D0V7 1026 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 INMTO95050 263 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 GNAZP19086 355 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 IQCKQ8N0W5 287 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 COQ8BQ96D53 544 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 IFT27Q9BW83 186 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 ADAP2Q9NPF8 381 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 BRD7Q9NPI1 651 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 CXCR6O00574 342 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms