RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ATXN7L1Q9ULK2 861 aaPredicted RBP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 VWA7Q9Y334 891 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 FRYQ5TBA9 3013 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 OR5K3A6NET4 321 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 GFYI3L273 518 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 PSIP1O75475 530 aaKnown RBP16.47■□□□□ 0.23
SCAF11-206ENST00000474828 DXOO77932 396 aaKnown RBP16.47■□□□□ 0.23
SCAF11-206ENST00000474828 WISP3O95389 354 aaPredicted RBP16.47■□□□□ 0.23
SCAF11-206ENST00000474828 PROS1P07225 676 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 RHOXF2BP0C7M4 288 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 STX2P32856 288 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 INHBCP55103 352 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 CDKN2DP55273 166 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 EIF3IQ13347 325 aaKnown RBP16.47■□□□□ 0.23
SCAF11-206ENST00000474828 BRD3Q15059 726 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 KYNUQ16719 465 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 TTLL9Q3SXZ7 439 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 ACSBG2Q5FVE4 666 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 FAM45BPQ6NSW5 357 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 KLHL35Q6PF15 583 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 USP53Q70EK8 1073 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 STRA8Q7Z7C7 330 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 PLXDC1Q8IUK5 500 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 CARFQ8N187 725 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 PHC3Q8NDX5 983 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 OR52E1Q8NGJ3 308 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 OR5AR1Q8NGP9 310 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 FAM45AQ8TCE6 357 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 RSC1A1Q92681 617 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 CDKL2Q92772 493 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 PDLIM5Q96HC4 596 aaKnown RBP16.47■□□□□ 0.23
SCAF11-206ENST00000474828 GPR21Q99679 349 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 CPNE1Q99829 537 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 RHOXF2Q9BQY4 288 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 TRIT1Q9H3H1 467 aaKnown RBP16.47■□□□□ 0.23
SCAF11-206ENST00000474828 CDC42EP4Q9H3Q1 356 aaKnown RBP16.47■□□□□ 0.23
SCAF11-206ENST00000474828 ACSS3Q9H6R3 686 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 RDH14Q9HBH5 336 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 TAS2R13Q9NYV9 303 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 NFU1Q9UMS0 254 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 ASF1AQ9Y294 204 aa16.47■□□□□ 0.23
SCAF11-206ENST00000474828 FAM149AA5PLN7 773 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 E5RI56 91 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 HGSO14964 777 aaPredicted RBP16.46■□□□□ 0.23
SCAF11-206ENST00000474828 VPS26AO75436 327 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 C1orf105O95561 183 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 TSPAN12O95859 305 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 RPN2P04844 631 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 MPC1LP0DKB6 136 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 SPINK2P20155 84 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 MAPK9P45984 424 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 SLMAPQ14BN4 828 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 KBTBD12Q3ZCT8 623 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 AMZ1Q400G9 498 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 DNTTIP2Q5QJE6 756 aaKnown RBP16.46■□□□□ 0.23
SCAF11-206ENST00000474828 HECTD2Q5U5R9 776 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 LRRC8EQ6NSJ5 796 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 UGT3A1Q6NUS8 523 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 DCUN1D3Q8IWE4 304 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 SIDT2Q8NBJ9 832 aaKnown RBP16.46■□□□□ 0.23
SCAF11-206ENST00000474828 HMGCLL1Q8TB92 370 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 FBF1Q8TES7 1133 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 ASB11Q8WXH4 323 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 PRR11Q96HE9 360 aaPredicted RBP16.46■□□□□ 0.23
SCAF11-206ENST00000474828 FERD3LQ96RJ6 166 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 NDNQ99608 321 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 SEMA6CQ9H3T2 930 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 ANKZF1Q9H8Y5 726 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 POPDC3Q9HBV1 291 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 PCDHGA8Q9Y5G5 932 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 KNTC1P50748 2209 aa16.46■□□□□ 0.23
SCAF11-206ENST00000474828 MATN2O00339 956 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 SLU7O95391 586 aaKnown RBP16.45■□□□□ 0.22
SCAF11-206ENST00000474828 ERGP11308 486 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 GP5P40197 560 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 CCNFP41002 786 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 MLLT3P42568 568 aaPredicted RBP16.45■□□□□ 0.22
SCAF11-206ENST00000474828 LSSP48449 732 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 CSRP3P50461 194 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 MAP9Q49MG5 647 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 UBAP2Q5T6F2 1119 aaKnown RBP16.45■□□□□ 0.22
SCAF11-206ENST00000474828 PRSS42Q7Z5A4 293 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 MARCH9Q86YJ5 346 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 ADGRF3Q8IZF5 1079 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 ANKRD7Q92527 254 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 ATXN7L3BQ96GX2 97 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 AHCYL2Q96HN2 611 aaKnown RBP16.45■□□□□ 0.22
SCAF11-206ENST00000474828 VPS39Q96JC1 886 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 CD180Q99467 661 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 GPR22Q99680 433 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 RBBP8Q99708 897 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 OLFM1Q99784 485 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 B3GNT4Q9C0J1 378 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 OR6C2Q9NZP2 312 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 TMEM9Q9P0T7 183 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 ICKQ9UPZ9 632 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 UNC13CQ8NB66 2214 aa16.45■□□□□ 0.22
SCAF11-206ENST00000474828 MAP1BP46821 2468 aaKnown RBP16.44■□□□□ 0.22
SCAF11-206ENST00000474828 CCDC187A0A096LP49 1063 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 ABHD2P08910 425 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms