RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CBX6O95503 412 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 MSL3P1P0C860 447 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 SLC1A1P43005 524 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 GLRBP48167 497 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 GEMP55040 296 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 PRKG2Q13237 762 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 OLIG2Q13516 323 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 ASTE1Q2TB18 679 aaPredicted RBP13.55□□□□□ -0.24
CCDC78-209ENST00000474647 ZRANB3Q5FWF4 1079 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 AMIGO1Q86WK6 493 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 VSTM4Q8IW00 320 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 GALNT16Q8N428 558 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 PHC3Q8NDX5 983 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 OR13C4Q8NGS5 318 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 ULK4Q96C45 1275 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 FER1L6-AS2Q96M78 137 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 DHRS4Q9BTZ2 278 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 PITPNM3Q9BZ71 974 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 IRAK4Q9NWZ3 460 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 ACTR10Q9NZ32 417 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 MASP2O00187 686 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 CCL22O00626 93 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 PSTPIP1O43586 416 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 KLF7O75840 302 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-209ENST00000474647 OR2B3O76000 313 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 CBSLP0DN79 551 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 ATP1B2P14415 290 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-209ENST00000474647 ITGALP20701 1170 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 CBSP35520 551 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 FOXL2P58012 376 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 MYBPC3Q14896 1274 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 TFDP3Q5H9I0 405 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 DCAF10Q5QP82 559 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 ZNF385CQ66K41 422 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-209ENST00000474647 SPESP1Q6UW49 350 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 TRIM73Q86UV7 250 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 NXPE1Q8N323 547 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 C19orf47Q8N9M1 422 aaKnown RBP13.54□□□□□ -0.24
CCDC78-209ENST00000474647 OR8K1Q8NGG5 319 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 TM9SF4Q92544 642 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 INPP5DQ92835 1189 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 IP6K3Q96PC2 410 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 RANBP9Q96S59 729 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 DNAJC7Q99615 494 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 COPS8Q99627 209 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 C17orf62Q9BQA9 187 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 GBA3Q9H227 469 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 OR52A5Q9H2C5 316 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 C10orf88Q9H8K7 445 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 TRHDEQ9UKU6 1024 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 CDYLQ9Y232 598 aa13.54□□□□□ -0.24
CCDC78-209ENST00000474647 COPG1Q9Y678 874 aaKnown RBP13.54□□□□□ -0.24
CCDC78-209ENST00000474647 CPAMD8Q8IZJ3 1885 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 hCG_1818297A0A087WSY0 165 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 MACROD2A1Z1Q3 448 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 C5orf60A6NFR6 353 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 WIPF3A6NGB9 483 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 H7C0C1 242 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 ANXA9O76027 345 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 CRTAMO95727 393 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 PDHA2P29803 388 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 CDC25BP30305 580 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
CCDC78-209ENST00000474647 HADHAP40939 763 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 ATP5OP48047 213 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 XIAPP98170 497 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 SSPNQ14714 243 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 TAZQ16635 292 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 CYP2A13Q16696 494 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 ITPRIPL1Q6GPH6 555 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 ZNF449Q6P9G9 518 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 ADGRF3Q8IZF5 1079 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 ZADH2Q8N4Q0 377 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 TTC13Q8NBP0 860 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 CCDC42Q96M95 316 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 CHP1Q99653 195 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 GORASP1Q9BQQ3 440 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 GOLPH3Q9H4A6 298 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 TFB2MQ9H5Q4 396 aaKnown RBP13.53□□□□□ -0.24
CCDC78-209ENST00000474647 MVB12BQ9H7P6 319 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 VPS37BQ9H9H4 285 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 NHEJ1Q9H9Q4 299 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-209ENST00000474647 FAM60AQ9NP50 221 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 TXLNGQ9NUQ3 528 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 P4HTMQ9NXG6 502 aa13.53□□□□□ -0.24
CCDC78-209ENST00000474647 IFT80Q9P2H3 777 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-209ENST00000474647 DHCR7Q9UBM7 475 aaKnown RBP13.53□□□□□ -0.24
CCDC78-209ENST00000474647 CSMD1Q96PZ7 3565 aa13.52□□□□□ -0.24
CCDC78-209ENST00000474647 APCP25054 2843 aa13.52□□□□□ -0.24
CCDC78-209ENST00000474647 C17orf113A0A1B0GUU1 675 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 HACD1B0YJ81 288 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 KLHL41O60662 606 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 IPO13O94829 963 aaKnown RBP13.52□□□□□ -0.25
CCDC78-209ENST00000474647 IGHEP01854 428 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 UGT2B7P16662 529 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 PSMB4P28070 264 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 RBL1P28749 1068 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 MC4RP32245 332 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 BOP1Q14137 746 aaKnown RBP13.52□□□□□ -0.25
CCDC78-209ENST00000474647 TRIM14Q14142 442 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms