RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 URI1O94763 535 aaPredicted RBP14.73□□□□□ -0.05
VARS-223ENST00000474643 EBLN1P0CF75 366 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 ATP1B2P14415 290 aaPredicted RBP14.73□□□□□ -0.05
VARS-223ENST00000474643 CDH3P22223 829 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 CA5AP35218 305 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 ARCN1P48444 511 aaKnown RBP14.73□□□□□ -0.05
VARS-223ENST00000474643 CDKN1CP49918 316 aaPredicted RBP14.73□□□□□ -0.05
VARS-223ENST00000474643 PPP1CAP62136 330 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 RPS15P62841 145 aaKnown RBP14.73□□□□□ -0.05
VARS-223ENST00000474643 DR1Q01658 176 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 KCNJ11Q14654 390 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 LACTB2Q53H82 288 aaPredicted RBP14.73□□□□□ -0.05
VARS-223ENST00000474643 ATP1A1-AS1Q5TC04 95 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 BPHLQ86WA6 291 aaPredicted RBP14.73□□□□□ -0.05
VARS-223ENST00000474643 SERPINA9Q86WD7 417 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 OTUD6BQ8N6M0 293 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 MNS1Q8NEH6 495 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
VARS-223ENST00000474643 ZFPM2Q8WW38 1151 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 LCN9Q8WX39 176 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 CPT1BQ92523 772 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 FERD3LQ96RJ6 166 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 INSM2Q96T92 566 aaPredicted RBP14.73□□□□□ -0.05
VARS-223ENST00000474643 SPRY4Q9C004 299 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 KIR3DX1Q9H7L2 352 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 CHRAC1Q9NRG0 131 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 ZDHHC3Q9NYG2 299 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 SLC2A6Q9UGQ3 507 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 MRFAP1Q9Y605 127 aa14.73□□□□□ -0.05
VARS-223ENST00000474643 CCDC162PA2VCL2 907 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 OR51F1A6NGY5 319 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 ZBTB11O95625 1053 aaPredicted RBP14.72□□□□□ -0.05
VARS-223ENST00000474643 GOT2P00505 430 aaKnown RBP14.72□□□□□ -0.05
VARS-223ENST00000474643 PRSS56P0CW18 603 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 FOLR1P15328 257 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 POLR2CP19387 275 aaPredicted RBP14.72□□□□□ -0.05
VARS-223ENST00000474643 ACRV1P26436 265 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 PPARGP37231 505 aaPredicted RBP14.72□□□□□ -0.05
VARS-223ENST00000474643 PRLHRP49683 370 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 TLE1Q04724 770 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 DNASE1L3Q13609 305 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 PTK6Q13882 451 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 SYTL3Q4VX76 610 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 FASTKD1Q53R41 847 aaKnown RBP14.72□□□□□ -0.05
VARS-223ENST00000474643 ANKRD22Q5VYY1 191 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 PCGF5Q86SE9 256 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 PPIL6Q8IXY8 311 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 OR4E2Q8NGC2 313 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 OR13J1Q8NGT2 312 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 OR4L1Q8NH43 312 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 SEC14L1Q92503 715 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 ZNF592Q92610 1267 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 N4BP2L2Q92802 583 aaPredicted RBP14.72□□□□□ -0.05
VARS-223ENST00000474643 SLCO2A1Q92959 643 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 SLC41A2Q96JW4 573 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 SRMSQ9H3Y6 488 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 XAB2Q9HCS7 855 aaKnown RBP14.72□□□□□ -0.05
VARS-223ENST00000474643 LHX9Q9NQ69 397 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 SYBUQ9NX95 663 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 PCYOX1Q9UHG3 505 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 SLC24A2Q9UI40 661 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 RIMKLBQ9ULI2 386 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 MAN2B2Q9Y2E5 1009 aa14.72□□□□□ -0.05
VARS-223ENST00000474643 C21orf140B9A014 251 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 F8W8V4 182 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 MATN2O00339 956 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 CPNE3O75131 537 aaKnown RBP14.71□□□□□ -0.05
VARS-223ENST00000474643 SCRG1O75711 98 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 NTRK1P04629 796 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 MAGEA6P43360 314 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 TUBB4BP68371 445 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 CRTC2Q53ET0 693 aaPredicted RBP14.71□□□□□ -0.05
VARS-223ENST00000474643 LYPLAL1Q5VWZ2 237 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 PWWP2BQ6NUJ5 590 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 SYDE1Q6ZW31 735 aaPredicted RBP14.71□□□□□ -0.05
VARS-223ENST00000474643 ACVR1CQ8NER5 493 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 OR8K5Q8NH50 307 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 CT55Q8WUE5 264 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 PEX13Q92968 403 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 MR1Q95460 341 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 LINC00615Q96LM1 132 aaPredicted RBP14.71□□□□□ -0.05
VARS-223ENST00000474643 RMDN2Q96LZ7 410 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 ZNF778Q96MU6 729 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 FCRL4Q96PJ5 515 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 KRT12Q99456 494 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 L2HGDHQ9H9P8 463 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 ANAPC2Q9UJX6 822 aa14.71□□□□□ -0.05
VARS-223ENST00000474643 FLNBO75369 2602 aaKnown RBP14.7□□□□□ -0.06
VARS-223ENST00000474643 AGAP14A8MT82 685 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 DNALI1O14645 258 aaPredicted RBP14.7□□□□□ -0.06
VARS-223ENST00000474643 AVILO75366 819 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 CREG1O75629 220 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 TMEM63AO94886 807 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 KLK3P07288 261 aaPredicted RBP14.7□□□□□ -0.06
VARS-223ENST00000474643 PAMP19021 973 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 GPR19Q15760 415 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 DBN1Q16643 649 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 AARS2Q5JTZ9 985 aaKnown RBP14.7□□□□□ -0.06
VARS-223ENST00000474643 IZUMO3Q5VZ72 239 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 CES3Q6UWW8 571 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms