RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 CNTN5O94779 1100 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF682O95780 498 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TRBC1P01850 177 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 THEGLP0DJG4 465 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 PRR23D2P0DMB1 279 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 ARFIP1P53367 373 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CRISP3P54108 245 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CSNK2BP67870 215 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 NAE1Q13564 534 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 PTPRCAPQ14761 206 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 PFKFB4Q16877 469 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SLC9B1Q4ZJI4 515 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 FAM133BQ5BKY9 247 aaKnown RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 RNF19BQ6ZMZ0 732 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 DET1Q7L5Y6 550 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 DHFR2Q86XF0 187 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SLC44A2Q8IWA5 706 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TBC1D21Q8IYX1 336 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SPEM1Q8N4L4 309 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CLEC1AQ8NC01 280 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SLC35F5Q8WV83 523 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CKAP2Q8WWK9 683 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TFGQ92734 400 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 ZSWIM3Q96MP5 696 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CASD1Q96PB1 797 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 PURBQ96QR8 312 aaKnown RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF347Q96SE7 839 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CPXM1Q96SM3 734 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 NPY6RQ99463 290 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 ASPNQ9BXN1 380 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 EBF3Q9H4W6 596 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 PAK6Q9NQU5 681 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CLN6Q9NWW5 311 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 PRPF19Q9UMS4 504 aaKnown RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF451Q9Y4E5 1061 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 HS3ST4Q9Y661 456 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SCN7AQ01118 1682 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 THSD7AQ9UPZ6 1657 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 PNMA8CA0A1B0GUJ8 204 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 RFXANKO14593 260 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 MYL12BO14950 172 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ANKRD28O15084 1053 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 MSI1O43347 362 aaKnown RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 SLC28A2O43868 658 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 SKAP2O75563 359 aaPredicted RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ERAL1O75616 437 aaKnown RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 PGLSO95336 258 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 P04436 131 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 EPORP19235 508 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 CD38P28907 300 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 PRDX6P30041 224 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 CRATP43155 626 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 CLCN4P51793 760 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 AFF3P51826 1226 aaKnown RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 CTBP2P56545 445 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 DCAF7P61962 342 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 DLG4P78352 724 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 FAM189BP81408 668 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 NPTX1Q15818 432 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ECM1Q16610 540 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 DCST1Q5T197 706 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 MANEALQ5VSG8 457 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 CST9Q5W186 159 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 CFAP52Q8N1V2 620 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 PLD5Q8N7P1 536 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 COX18Q8N8Q8 333 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 OR4A15Q8NGL6 344 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 OR2AJ1Q8NGZ0 328 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 TMEM174Q8WUU8 243 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 RFKQ969G6 155 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 EFHD2Q96C19 240 aaPredicted RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 SLC35G5Q96KT7 338 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF354BQ96LW1 612 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 SLC17A9Q9BYT1 436 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ZBP1Q9H171 429 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ALG9Q9H6U8 611 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 MOV10Q9HCE1 1003 aaKnown RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 TIMMDC1Q9NPL8 285 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 AGPAT4Q9NRZ5 378 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 POT1Q9NUX5 634 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 TMEM45AQ9NWC5 275 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 RGS17Q9UGC6 210 aaPredicted RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 FCF1Q9Y324 198 aaKnown RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 E7EQ34 232 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 BCAT2O15382 392 aaPredicted RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 PEX1O43933 1283 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 LCA5LO95447 670 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 HLA-DQA2P01906 255 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 SNRPB2P08579 225 aaKnown RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ACP5P13686 325 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ACADSP16219 412 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 PRPS1L1P21108 318 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 GSTM3P21266 225 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 DCKP27707 260 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 CLK1P49759 484 aaKnown RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 CAPZA1P52907 286 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 BLVRAP53004 296 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 LIMK2P53671 638 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 KCNJ2P63252 427 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 MRPL28Q13084 256 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms