RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ME3Q16798 604 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 AWAT1Q58HT5 328 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 TCP11X2Q5H9J9 407 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 C9orf152Q5JTZ5 239 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 HECTD3Q5T447 861 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 GARNL3Q5VVW2 1013 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ACSM2BQ68CK6 577 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 PET117Q6UWS5 81 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 Q6ZS52 159 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 MDGA2Q7Z553 956 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 SLFN11Q7Z7L1 901 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 NEK8Q86SG6 692 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 SNX32Q86XE0 403 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 PALB2Q86YC2 1186 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 CCDC13Q8IYE1 715 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 SCML4Q8N228 414 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 TTC30BQ8N4P2 665 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 MINDY1Q8N5J2 469 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ZBTB8BQ8NAP8 495 aaPredicted RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 MSANTD4Q8NCY6 345 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 SLC9A6Q92581 669 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 PTERQ96BW5 349 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 MMABQ96EY8 250 aaPredicted RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 VCPIP1Q96JH7 1222 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 FAM20AQ96MK3 541 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 JAKMIP1Q96N16 626 aaKnown RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 ZNF570Q96NI8 536 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 RAB3IPQ96QF0 476 aaPredicted RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 ZNF347Q96SE7 839 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 KIFC3Q9BVG8 833 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 CCDC106Q9BWC9 280 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 FTHL17Q9BXU8 183 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 HRH4Q9H3N8 390 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 NDST4Q9H3R1 872 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 PLK3Q9H4B4 646 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 CXorf56Q9H5V9 222 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ACTR5Q9H9F9 607 aaPredicted RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 ERVMER34-1Q9H9K5 563 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 RAVER2Q9HCJ3 691 aaKnown RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 Q9N2J8 555 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 TRPV5Q9NQA5 729 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ATP8A2Q9NTI2 1148 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 GRHL1Q9NZI5 618 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 NCKIPSDQ9NZQ3 722 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 OGFRQ9NZT2 677 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 FBXL17Q9UF56 701 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 CNOT8Q9UFF9 292 aaKnown RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 ADAM18Q9Y3Q7 739 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 TRPV2Q9Y5S1 764 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 MAU2Q9Y6X3 613 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ZFC3H1O60293 1989 aaKnown RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 MN1Q10571 1320 aaPredicted RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 FLNAP21333 2647 aaKnown RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 MYH4Q9Y623 1939 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 COL6A5A8TX70 2615 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 A0A0G2JK05 382 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 WDR91A4D1P6 747 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 FAM157AC9JC47 383 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 RHODO00212 210 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CHL1O00533 1208 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 SCAMP1O15126 338 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 LDLRAD4O15165 306 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 EXTL3O43909 919 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 UGDHO60701 494 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 PAGE4O60829 102 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 AVILO75366 819 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ECI2O75521 394 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 RFPL2O75678 378 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 NADKO95544 446 aaPredicted RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 ESRRBO95718 433 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 BMP15O95972 392 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CHRNA1P02708 482 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ADRB2P07550 413 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CCDC175P0C221 793 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ZNF286BP0CG31 522 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CTSAP10619 480 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CD99P14209 185 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 FDPSP14324 419 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 ERCC2P18074 760 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 TFEBP19484 476 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 GPD1P21695 349 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 DRD4P21917 467 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 HOXC8P31273 242 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CCKBRP32239 447 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CDAP32320 146 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CSTF2P33240 577 aaKnown RBP eCLIP2.34□□□□□ -2.039e-7■■■■□ 19.9
CALD1-216ENST00000473714 GPR12P47775 334 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 SLC12A2P55011 1212 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 STIM1Q13586 685 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 FGFBP1Q14512 234 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 IRF3Q14653 427 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 LPIN1Q14693 890 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 RNPS1Q15287 305 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 RPE65Q16518 533 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 C15orf59Q2T9L4 293 aaPredicted RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 TMEM119Q4V9L6 283 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CCDC184Q52MB2 194 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 C1QTNF12Q5T7M4 302 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 NUGGCQ68CJ6 796 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 SUMO4Q6EEV6 95 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms