RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 FXNQ16595 210 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 PLEKHG6Q3KR16 790 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 PITRM1Q5JRX3 1037 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 TSTD2Q5T7W7 516 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 SH3PXD2AQ5TCZ1 1133 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 TBPL2Q6SJ96 375 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 CCBE1Q6UXH8 406 aaPredicted RBP9.92□□□□□ -0.82
APTX-216ENST00000472896 ZPBP2Q6X784 338 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 LARP4Q71RC2 724 aaKnown RBP eCLIP9.92□□□□□ -0.82
APTX-216ENST00000472896 RETREG3Q86VR2 466 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 PSTKQ8IV42 348 aaKnown RBP9.92□□□□□ -0.82
APTX-216ENST00000472896 FUNDC1Q8IVP5 155 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 UBQLNLQ8IYU4 475 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 CLEC4FQ8N1N0 589 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 SVOPLQ8N434 492 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 KCTD4Q8WVF5 259 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 JPH3Q8WXH2 748 aaPredicted RBP9.92□□□□□ -0.82
APTX-216ENST00000472896 NXNL1Q96CM4 212 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 LRRC58Q96CX6 371 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 ATXN7L3BQ96GX2 97 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 TMEM246Q9BRR3 403 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 TTPALQ9BTX7 342 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 GON7Q9BXV9 100 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 MKRN2Q9H000 416 aaKnown RBP9.92□□□□□ -0.82
APTX-216ENST00000472896 FAM124BQ9H5Z6 455 aaPredicted RBP9.92□□□□□ -0.82
APTX-216ENST00000472896 RETREG1Q9H6L5 497 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 KAT8Q9H7Z6 458 aaKnown RBP9.92□□□□□ -0.82
APTX-216ENST00000472896 CASS4Q9NQ75 786 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 GPATCH2LQ9NWQ4 482 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 VANGL2Q9ULK5 521 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 TPRKBQ9Y3C4 175 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 PCDHB3Q9Y5E6 796 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 RALGAPA1Q6GYQ0 2036 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TMEM233B4DJY2 109 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CHURC1-FNTBB4DL54 471 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 M0QYV0 167 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 SLC1A7O00341 560 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 NR5A2O00482 541 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TM4SF5O14894 197 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 B4GALT5O43286 388 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CNTN5O94779 1100 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TNNC2P02585 160 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 YES1P07947 543 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 SLC35E2BP0CK96 405 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 MYCLP1P12525 358 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 IL7RP16871 459 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 FCARP24071 287 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 FNTBP49356 437 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 MRPL19P49406 292 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 GSK3BP49841 420 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 ST13P50502 369 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 AP2S1P53680 142 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 OR2B6P58173 313 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 RAB10P61026 200 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CREMQ03060 361 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 SIM2Q14190 667 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 CA9Q16790 459 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CDO1Q16878 200 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 ZIK1Q3SY52 487 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 ZNF404Q494X3 552 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 YIF1BQ5BJH7 314 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CATSPEREQ5SY80 951 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TMEM236Q5W0B7 351 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 NCBP2-AS2Q69YL0 99 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TRNP1Q6NT89 227 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 NOTUMQ6P988 496 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 FAM183BPQ6ZVS7 135 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CUZD1Q86UP6 607 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 RALGPS2Q86X27 583 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 SLC22A9Q8IVM8 553 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 RAVER1Q8IY67 606 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 MIER2Q8N344 545 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 FAM109AQ8N4B1 249 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 AADATQ8N5Z0 425 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CCDC185Q8N715 623 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 FBLIM1Q8WUP2 373 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TMEM125Q96AQ2 219 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 ZBTB45Q96K62 511 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 GPR78Q96P69 363 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 AGAP2Q99490 1192 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 COQ7Q99807 217 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 XYLT2Q9H1B5 865 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TOR3AQ9H497 397 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 ALG2Q9H553 416 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CYP3A43Q9HB55 503 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 GIMAP4Q9NUV9 329 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 GMPR2Q9P2T1 348 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 SLCO3A1Q9UIG8 710 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 KIAA1257Q9ULG3 409 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 MRPS17Q9Y2R5 130 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 MRPS23Q9Y3D9 190 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 SPEF1Q9Y4P9 236 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 PCDHGA8Q9Y5G5 932 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CNOT1A5YKK6 2376 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 PNMA8CA0A1B0GUJ8 204 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CASTOR2A6NHX0 329 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CCDC154A6NI56 674 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 METTL15A6NJ78 407 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 LOC110117498-PIK3R3F6TDL0 507 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 FXYD1O00168 92 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms