RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ASF1AQ9Y294 204 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 A0A1B0GTQ1 180 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 NEMP2A6NFY4 417 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 UBXN8O00124 270 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 IFRD1O00458 451 aaPredicted RBP18.72■□□□□ 0.59
PSPC1-203ENST00000471658 RBP1P09455 135 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 ETV4P43268 484 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 ARRB1P49407 418 aaPredicted RBP18.72■□□□□ 0.59
PSPC1-203ENST00000471658 ATP1A2P50993 1020 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 WDR4P57081 412 aaKnown RBP18.72■□□□□ 0.59
PSPC1-203ENST00000471658 PPP1R3AQ16821 1122 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.72■□□□□ 0.59
PSPC1-203ENST00000471658 WASH2PQ6VEQ5 465 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 MBOAT1Q6ZNC8 495 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 GATAD2AQ86YP4 633 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 CCDC63Q8NA47 563 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 STAG3L4Q8TBR4 150 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 NRTNQ99748 197 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 MRPL57Q9BQC6 102 aaKnown RBP18.72■□□□□ 0.59
PSPC1-203ENST00000471658 GTPBP2Q9BX10 602 aaKnown RBP18.72■□□□□ 0.59
PSPC1-203ENST00000471658 SLC12A9Q9BXP2 914 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 NUSAP1Q9BXS6 441 aaKnown RBP18.72■□□□□ 0.59
PSPC1-203ENST00000471658 WASH6PQ9NQA3 447 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 ZNF624Q9P2J8 865 aaPredicted RBP18.72■□□□□ 0.59
PSPC1-203ENST00000471658 FRYLO94915 3013 aa18.72■□□□□ 0.59
PSPC1-203ENST00000471658 NCF1BA6NI72 391 aaPredicted RBP18.71■□□□□ 0.59
PSPC1-203ENST00000471658 NCF1CA8MVU1 366 aaPredicted RBP18.71■□□□□ 0.59
PSPC1-203ENST00000471658 KHNYNO15037 678 aaKnown RBP18.71■□□□□ 0.59
PSPC1-203ENST00000471658 C1orf105O95561 183 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 C8GP07360 202 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 RETP07949 1114 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 F3P13726 295 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 NCF1P14598 390 aaPredicted RBP18.71■□□□□ 0.59
PSPC1-203ENST00000471658 ENGP17813 658 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 PRKG2Q13237 762 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 IYDQ6PHW0 289 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 GKN2Q86XP6 184 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 GPSM1Q86YR5 675 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 NAGSQ8N159 534 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 RHEBL1Q8TAI7 183 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 ZDHHC1Q8WTX9 485 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 FOPNLQ96NB1 174 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 FERD3LQ96RJ6 166 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 DOLKQ9UPQ8 538 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 ZFC3H1O60293 1989 aaKnown RBP18.71■□□□□ 0.59
PSPC1-203ENST00000471658 PCDH15Q96QU1 1955 aa18.71■□□□□ 0.59
PSPC1-203ENST00000471658 B4DGG1 531 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 LMO7DNF2Z398 122 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 G3V2L1 256 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 TM9SF1O15321 606 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 FFAR2O15552 330 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 KERAO60938 352 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 ZWINTO95229 277 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 GUCA1CO95843 209 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 GIMD1P0DJR0 217 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 MTHFD2P13995 350 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 EPHA8P29322 1005 aaPredicted RBP18.71■□□□□ 0.58
PSPC1-203ENST00000471658 SLC19A1P41440 591 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 HALP42357 657 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 KPNA2P52292 529 aaKnown RBP18.71■□□□□ 0.58
PSPC1-203ENST00000471658 CCDC153Q494R4 210 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 ADAMTSL2Q86TH1 951 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 LMNTD1Q8N9Z9 388 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 PAIP2Q9BPZ3 127 aaKnown RBP18.71■□□□□ 0.58
PSPC1-203ENST00000471658 MECRQ9BV79 373 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 PARVBQ9HBI1 364 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 PLAGL1Q9UM63 463 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 OARD1Q9Y530 152 aa18.71■□□□□ 0.58
PSPC1-203ENST00000471658 SUPT3HB4E1H0 165 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 SLC16A5O15375 505 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 SUPT3HO75486 399 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 CATP04040 527 aaKnown RBP18.7■□□□□ 0.58
PSPC1-203ENST00000471658 ANXA6P08133 673 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 SYPP08247 313 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 MTHFD1P11586 935 aaKnown RBP18.7■□□□□ 0.58
PSPC1-203ENST00000471658 CHN1P15882 459 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 RPIAP49247 311 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 SF3A2Q15428 464 aaKnown RBP18.7■□□□□ 0.58
PSPC1-203ENST00000471658 TGFBIQ15582 683 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 C18orf21Q32NC0 220 aaPredicted RBP18.7■□□□□ 0.58
PSPC1-203ENST00000471658 FBXO48Q5FWF7 155 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 UNC5DQ6UXZ4 953 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 KANSL1Q7Z3B3 1105 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 NKIRAS1Q9NYS0 192 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 SIRPGQ9P1W8 387 aa18.7■□□□□ 0.58
PSPC1-203ENST00000471658 TDRKHQ9Y2W6 561 aaKnown RBP18.7■□□□□ 0.58
PSPC1-203ENST00000471658 WDR91A4D1P6 747 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 DLX3O60479 287 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 TPBGLP0DKB5 382 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 CPA3P15088 417 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 CYP2A7P20853 494 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 KCNA4P22459 653 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 SLC18A1P54219 525 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 SPEM2Q0P670 501 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 SP140Q13342 867 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 GRB7Q14451 532 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 IL27RAQ6UWB1 636 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 FRA10AC1Q70Z53 315 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 OR5K2Q8NHB8 316 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 SAP25Q8TEE9 199 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms