RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 LZTS3O60299 673 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-208ENST00000471322 CDK14O94921 469 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 ENO1P06733 434 aaKnown RBP17.12■□□□□ 0.33
HSPG2-208ENST00000471322 MPC1LP0DKB6 136 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 VCLP18206 1134 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 EPHA3P29320 983 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 PRDX6P30041 224 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 CCR7P32248 378 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 HK3P52790 923 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 CDH13P55290 713 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 PPP2CBP62714 309 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 PPP2CAP67775 309 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 ARHGAP8P85298 464 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 DPTQ07507 201 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 SFSWAPQ12872 951 aaKnown RBP17.12■□□□□ 0.33
HSPG2-208ENST00000471322 CDC16Q13042 620 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 UBAP2LQ14157 1087 aaKnown RBP17.12■□□□□ 0.33
HSPG2-208ENST00000471322 PCBP2Q15366 365 aaKnown RBP eCLIP17.12■□□□□ 0.33
HSPG2-208ENST00000471322 TTC23LQ6PF05 361 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 NEK10Q6ZWH5 1172 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 TREML1Q86YW5 311 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 CPSF7Q8N684 471 aaKnown RBP17.12■□□□□ 0.33
HSPG2-208ENST00000471322 CADM4Q8NFZ8 388 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 OR56A4Q8NGH8 313 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 FOXJ1Q92949 421 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 LOXL4Q96JB6 756 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 WDR55Q9H6Y2 383 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-208ENST00000471322 MID1IP1Q9NPA3 183 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 ITM2BQ9Y287 266 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-208ENST00000471322 RALGAPA1Q6GYQ0 2036 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 KNL1Q8NG31 2342 aa17.12■□□□□ 0.33
HSPG2-208ENST00000471322 NCF1BA6NI72 391 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-208ENST00000471322 LRRC72A6NJI9 287 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 METTL12A8MUP2 240 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 NCF1CA8MVU1 366 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-208ENST00000471322 FADS2P1A8MWK0 482 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 TMEM233B4DJY2 109 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 E9PBE3 544 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 SDHDO14521 159 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 AZIN1O14977 448 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 SPINT1O43278 529 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 NUAK1O60285 661 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 KLHL41O60662 606 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 C8GP07360 202 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 ENO2P09104 434 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-208ENST00000471322 NCF1P14598 390 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-208ENST00000471322 TGM1P22735 817 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 KCNJ2P63252 427 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 SH3BP2P78314 561 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 BTKQ06187 659 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 GBX1Q14549 363 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 PPP1R3AQ16821 1122 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 NXNQ6DKJ4 435 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 SULT1C3Q6IMI6 304 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 PHYKPLQ8IUZ5 450 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 KIF2BQ8N4N8 673 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 OR2T34Q8NGX1 318 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 CXorf40AQ8TE69 158 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 TRPC4APQ8TEL6 797 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 ASZ1Q8WWH4 475 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 KLK6Q92876 244 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 NUS1Q96E22 293 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 HGH1Q9BTY7 390 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 TRIM54Q9BYV2 358 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 ZCCHC2Q9C0B9 1178 aaKnown RBP17.11■□□□□ 0.33
HSPG2-208ENST00000471322 SEMA4GQ9NTN9 838 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 PILRBQ9UKJ0 227 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 PCTPQ9UKL6 214 aa17.11■□□□□ 0.33
HSPG2-208ENST00000471322 SLC16A5O15375 505 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 GYG2O15488 501 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 PLRG1O43660 514 aaKnown RBP17.1■□□□□ 0.33
HSPG2-208ENST00000471322 AP1G1O43747 822 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 RASSF9O75901 435 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 RECQL5O94762 991 aaPredicted RBP17.1■□□□□ 0.33
HSPG2-208ENST00000471322 IGHV4-34P06331 123 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 C6P13671 934 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
HSPG2-208ENST00000471322 GM2AP17900 193 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 PKNOX1P55347 436 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 RPS27LQ71UM5 84 aaKnown RBP17.1■□□□□ 0.33
HSPG2-208ENST00000471322 DET1Q7L5Y6 550 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 SYT12Q8IV01 421 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 CHCHD4Q8N4Q1 142 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 AGAP11Q8TF27 550 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 TBC1D10AQ9BXI6 508 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 EBF2Q9HAK2 575 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 RXFP3Q9NSD7 469 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 PTBP2Q9UKA9 531 aaKnown RBP17.1■□□□□ 0.33
HSPG2-208ENST00000471322 TSPAN6O43657 245 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 CRCPO75575 148 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 PCDH8O95206 1070 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 ESRRBO95718 433 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 CFIP05156 583 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 TMEM115Q12893 351 aaPredicted RBP17.1■□□□□ 0.33
HSPG2-208ENST00000471322 SP140Q13342 867 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 UGT3A2Q3SY77 523 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 KIAA0895LQ68EN5 471 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 LAYNQ6UX15 382 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 TEX9Q8N6V9 391 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms