RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 A0A087X0M5 115 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 A0A1B0GX30 115 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 CCDC189A1A4V9 331 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 HYKKA2RU49 373 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 PI4KAP2A4QPH2 592 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 PGPEP1LA6NFU8 196 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 ZNF195O14628 629 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 KLF11O14901 512 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 PI15O43692 258 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 CREB3O43889 395 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 SSX4O60224 188 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 MITFO75030 526 aaPredicted RBP1.24□□□□□ -2.21
UBXN4-207ENST00000471246 KHDRBS3O75525 346 aaKnown RBP1.24□□□□□ -2.21
UBXN4-207ENST00000471246 PRKRAO75569 313 aaKnown RBP1.24□□□□□ -2.21
UBXN4-207ENST00000471246 CREG1O75629 220 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 PIGNO95427 931 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 TRIM49P0CI25 452 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 TRIM49CP0CI26 452 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 VPREB1P12018 145 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 GATA1P15976 413 aaPredicted RBP1.24□□□□□ -2.21
UBXN4-207ENST00000471246 MAPK4P31152 587 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 NOVP48745 357 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 SUOXP51687 545 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 SLC8A3P57103 927 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 DCAF7P61962 342 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 TMF1P82094 1093 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 CXCL9Q07325 125 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 MAMLD1Q13495 774 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 GRAPQ13588 217 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 KRT33BQ14525 404 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 TEAD2Q15562 447 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 SGSM1Q2NKQ1 1148 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 SNAI3Q3KNW1 292 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 HSP90AB4PQ58FF6 505 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 TCTEX1D4Q5JR98 221 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 HAUS3Q68CZ6 603 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 PSRC1Q6PGN9 363 aaPredicted RBP1.24□□□□□ -2.21
UBXN4-207ENST00000471246 DOK6Q6PKX4 331 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 TMCO3Q6UWJ1 677 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 SUSD1Q6UWL2 747 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 INTS8Q75QN2 995 aaKnown RBP1.24□□□□□ -2.21
UBXN4-207ENST00000471246 HAUS6Q7Z4H7 955 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 MCEMP1Q8IX19 187 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 CFAP206Q8IYR0 622 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 ADGRF2Q8IZF7 708 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 DCLK2Q8N568 766 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 TRIML1Q8N9V2 468 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 PPFIBP2Q8ND30 876 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 OR5AP2Q8NGF4 316 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 OR2AJ1Q8NGZ0 328 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 RNF128Q8TEB7 428 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 ZFAND2BQ8WV99 257 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 DYRK2Q92630 601 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 USP6NLQ92738 828 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 ERLEC1Q96DZ1 483 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 MAGED4Q96JG8 741 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 NSMCE3Q96MG7 304 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 AGAP3Q96P47 875 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 ZNF300Q96RE9 604 aaPredicted RBP1.24□□□□□ -2.21
UBXN4-207ENST00000471246 C16orf70Q9BSU1 422 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 CLEC7AQ9BXN2 247 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 RTN4RQ9BZR6 473 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 DPAGT1Q9H3H5 408 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 HRH4Q9H3N8 390 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 CHMP1AQ9HD42 196 aaPredicted RBP1.24□□□□□ -2.21
UBXN4-207ENST00000471246 TAB2Q9NYJ8 693 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 EPHA6Q9UF33 1036 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 LRWD1Q9UFC0 647 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 ZDHHC2Q9UIJ5 367 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 MTUS1Q9ULD2 1270 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 EXO1Q9UQ84 846 aaKnown RBP1.24□□□□□ -2.21
UBXN4-207ENST00000471246 WDR37Q9Y2I8 494 aa1.24□□□□□ -2.21
UBXN4-207ENST00000471246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.24□□□□□ -2.212e-8■■■■□ 19.9
UBXN4-207ENST00000471246 ASTN2O75129 1339 aaPredicted RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 LRRC72A6NJI9 287 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 E9PQ18 207 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 F5H0A9 414 aaPredicted RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 EPB41L2O43491 1005 aaKnown RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 OR10H2O60403 315 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 USO1O60763 962 aaKnown RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 NXPH2O95156 264 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 ACADSP16219 412 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 CA6P23280 308 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 MMP12P39900 470 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 HADHAP40939 763 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 OPRL1P41146 370 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 SLC15A1P46059 708 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 MFAP4P55083 255 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 DRP2Q13474 957 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 IRF3Q14653 427 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 E2F5Q15329 346 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 UGP2Q16851 508 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 C2CD6Q53TS8 623 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 MDH1BQ5I0G3 518 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 FAAH2Q6GMR7 532 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 CCDC70Q6NSX1 233 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 FAM180BQ6P0A1 224 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 TRIM65Q6PJ69 517 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 PAQR6Q6TCH4 344 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 FIP1L1Q6UN15 594 aaKnown RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms