RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 C16orf70Q9BSU1 422 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 SH3GLB2Q9NR46 395 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 WSB2Q9NYS7 404 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-202ENST00000470094 RHCGQ9UBD6 479 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 CFDP1Q9UEE9 299 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-202ENST00000470094 GIMAP2Q9UG22 337 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 PTRH2Q9Y3E5 179 aaKnown RBP3.59□□□□□ -1.83
BRCA2-202ENST00000470094 KIAA1210Q9ULL0 1709 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 NTN3O00634 580 aaPredicted RBP3.58□□□□□ -1.84
BRCA2-202ENST00000470094 CREG1O75629 220 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 CLPTM1O96005 669 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 RPN1P04843 607 aaKnown RBP3.58□□□□□ -1.84
BRCA2-202ENST00000470094 SERPINB2P05120 415 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 GNB3P16520 340 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 PSMC6P62333 389 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 CDK3Q00526 305 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 NR1D2Q14995 579 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 RASA2Q15283 850 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 C15orf59Q2T9L4 293 aaPredicted RBP3.58□□□□□ -1.84
BRCA2-202ENST00000470094 ALDH1L2Q3SY69 923 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 CCDC184Q52MB2 194 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 IGSF11Q5DX21 431 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 GRTP1Q5TC63 336 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 NAA16Q6N069 864 aaPredicted RBP3.58□□□□□ -1.84
BRCA2-202ENST00000470094 LINGO4Q6UY18 593 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 FAM114A1Q8IWE2 563 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 FBXO39Q8N4B4 442 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 AFAP1Q8N556 730 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 CTCFLQ8NI51 663 aaPredicted RBP3.58□□□□□ -1.84
BRCA2-202ENST00000470094 RADILQ96JH8 1075 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 CDRT15Q96T59 188 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 FNDC11Q9BVV2 318 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 MMP27Q9H306 513 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 ACKR4Q9NPB9 350 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 C2orf42Q9NWW7 574 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 MORF4L1Q9UBU8 362 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 NOL7Q9UMY1 257 aaKnown RBP3.58□□□□□ -1.84
BRCA2-202ENST00000470094 GRIP1Q9Y3R0 1128 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 STK36Q9NRP7 1315 aa3.58□□□□□ -1.84
BRCA2-202ENST00000470094 DNM1LO00429 736 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 SH2B2O14492 632 aaPredicted RBP3.57□□□□□ -1.84
BRCA2-202ENST00000470094 XRCC3O43542 346 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 ENTPD3O75355 529 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 TRIM21P19474 475 aaKnown RBP3.57□□□□□ -1.84
BRCA2-202ENST00000470094 CEACAM8P31997 349 aaPredicted RBP3.57□□□□□ -1.84
BRCA2-202ENST00000470094 MATR3P43243 847 aaKnown RBP eCLIP3.57□□□□□ -1.84
BRCA2-202ENST00000470094 STAT2P52630 851 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 CX3CL1P78423 397 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 LGALS3BPQ08380 585 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 PNRC1Q12796 327 aaPredicted RBP3.57□□□□□ -1.84
BRCA2-202ENST00000470094 PSMD6Q15008 389 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 TAF13Q15543 124 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 NTRK2Q16620 822 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 TMEM266Q2M3C6 531 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 GTDC1Q4AE62 458 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 MDH1BQ5I0G3 518 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 ARHGEF16Q5VV41 709 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 GPR139Q6DWJ6 353 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 RPUSD3Q6P087 351 aaKnown RBP3.57□□□□□ -1.84
BRCA2-202ENST00000470094 FIGLAQ6QHK4 219 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 ANKRD23Q86SG2 305 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 CEP57Q86XR8 500 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 SCML4Q8N228 414 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 ZNF383Q8NA42 475 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 OR1J1Q8NGS3 322 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 OR2AJ1Q8NGZ0 328 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 MOSPD2Q8NHP6 518 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 HCAR2Q8TDS4 363 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 RNF128Q8TEB7 428 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 ZFAND2BQ8WV99 257 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 ZMAT2Q96NC0 199 aaKnown RBP3.57□□□□□ -1.84
BRCA2-202ENST00000470094 ASCL2Q99929 193 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 DPAGT1Q9H3H5 408 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 PDE7BQ9NP56 450 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 GIMAP4Q9NUV9 329 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 OSER1Q9NX31 292 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 OSGIN1Q9UJX0 560 aa3.57□□□□□ -1.84
BRCA2-202ENST00000470094 ZNF541Q9H0D2 1346 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 IGLV9-49A0A0B4J1Y8 123 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 HYKKA2RU49 373 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 HEPACAM2A8MVW5 462 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 E9PI62 339 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 UBE2CO00762 179 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 ADAMDEC1O15204 470 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 ADAM20O43506 726 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 TSPAN1O60635 241 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 MED24O75448 989 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 EML2O95834 649 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 IGLV1-44P01699 117 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 EDN1P05305 212 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 GLULP15104 373 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 GABRA5P31644 462 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 VEGFCP49767 419 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 PDX1P52945 283 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 ROR1Q01973 937 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 ITGA9Q13797 1035 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 PCLAFQ15004 111 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 C14orf177Q52M58 125 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 FFAR4Q5NUL3 377 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 NOTCH2NLQ7Z3S9 236 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms