RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 LDB1Q86U70 411 aaPredicted RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 SERPINA9Q86WD7 417 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 PLPP6Q8IY26 295 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 ZBTB2Q8N680 514 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 ARMC7Q9H6L4 198 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 NOL11Q9H8H0 719 aaKnown RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 BPIFA1Q9NP55 256 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 KLHL28Q9NXS3 571 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 WWOXQ9NZC7 414 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 SPO11Q9Y5K1 396 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 OAS3Q9Y6K5 1087 aaKnown RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 CSPG5O95196 566 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 DHFRP00374 187 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 PRNPP04156 253 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 SRPRAP08240 638 aaKnown RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 PEPDP12955 493 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 CTPS1P17812 591 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 ELP6Q0PNE2 266 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 SCRN3Q0VDG4 424 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 PRKG2Q13237 762 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 KLHL17Q6TDP4 642 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 FAM151BQ6UXP7 276 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 LYSMD3Q7Z3D4 306 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 CDCA3Q99618 268 aaPredicted RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 DUSP12Q9UNI6 340 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 HTRA2O43464 458 aaPredicted RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 H6PDO95479 791 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 LSM12Q3MHD2 195 aaKnown RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 HCAR2Q8TDS4 363 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 CENPNQ96H22 339 aaPredicted RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 SH3BP4Q9P0V3 963 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 ERGIC3Q9Y282 383 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 STON1Q9Y6Q2 735 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 ZBTB14O43829 449 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 RGRP47804 291 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 DGKGP49619 791 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 SYTL3Q4VX76 610 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 THAP5Q7Z6K1 395 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 TMC8Q8IU68 726 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 TXNDC5Q8NBS9 432 aaKnown RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 RBM15BQ8NDT2 890 aaKnown RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 MDGA1Q8NFP4 955 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 RNF145Q96MT1 663 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 GPR78Q96P69 363 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 LYSMD1Q96S90 227 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 RBM4BQ9BQ04 359 aaKnown RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 RBM4Q9BWF3 364 aaKnown RBP6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 CIPCQ9C0C6 399 aa6.87□□□□□ -1.31
GAPVD1-215ENST00000470056 PIPSLA2A3N6 862 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 CAPN14A8MX76 684 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 EPHA3P29320 983 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 CDK9P50750 372 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 SPRED3Q2MJR0 410 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 ZNF678Q5SXM1 525 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 LIN54Q6MZP7 749 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 NIPAL1Q6NVV3 410 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 TMEM150AQ86TG1 271 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 SLC44A2Q8IWA5 706 aaPredicted RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 GJD3Q8N144 294 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 CPSF7Q8N684 471 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 FLCNQ8NFG4 579 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 EFHD2Q96C19 240 aaPredicted RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 SLC46A2Q9BY10 475 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 UNKQ9C0B0 810 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 DUS2Q9NX74 493 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 MARK1Q9P0L2 795 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 SCAMP3O14828 347 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 FZD6O60353 706 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 TNFRSF21O75509 655 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 GUCA1CO95843 209 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 FTH1P02794 183 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 CYP2A7P20853 494 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 ERP29P30040 261 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 SGSHP51688 502 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 CCNG1P51959 295 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 GPM6BQ13491 265 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 PHKG1Q16816 387 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 MEAF6Q9HAF1 191 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 LMCD1Q9NZU5 365 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 PATJQ8NI35 1801 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 ZNF701M0R085 212 aaPredicted RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 OTCP00480 354 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 CHRNGP07510 517 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 PABPC4LP0CB38 370 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 HNRNPLP14866 589 aaKnown RBP eCLIP6.86□□□□□ -1.312e-7■■■□□ 18.8
GAPVD1-215ENST00000470056 CSRP3P50461 194 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 PDGFRLQ15198 375 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 TMEM240Q5SV17 173 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 POC5Q8NA72 575 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 MCFD2Q8NI22 146 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 MYEOVQ96EZ4 313 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 TMEM45AQ9NWC5 275 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 SPATA2Q9UM82 520 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 KPNA3O00505 521 aaPredicted RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 TPD52L2O43399 206 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 CCNKO75909 580 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 PRKCGP05129 697 aa6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 ENO2P09104 434 aaPredicted RBP6.86□□□□□ -1.31
GAPVD1-215ENST00000470056 TYRP14679 529 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms