RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 POT1Q9NUX5 634 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 TOR4AQ9NXH8 423 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 ADAMTS6Q9UKP5 1117 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 PLAGL1Q9UM63 463 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 ASF1AQ9Y294 204 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 EPG5Q9HCE0 2579 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 COL27A1Q8IZC6 1860 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-209ENST00000469852 UQCRHLA0A096LP55 91 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 SPAARA0A1B0GVQ0 90 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 NUDT21O43809 227 aaKnown RBP14.4□□□□□ -0.1
COL9A3-209ENST00000469852 RFPL1O75677 317 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 KRT38O76015 456 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 TOP3BO95985 862 aaKnown RBP14.4□□□□□ -0.1
COL9A3-209ENST00000469852 VIPP01282 170 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 C2P06681 752 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 UQCRHP07919 91 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 SNRPAP09012 282 aaKnown RBP14.4□□□□□ -0.1
COL9A3-209ENST00000469852 CBSLP0DN79 551 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 ENO3P13929 434 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-209ENST00000469852 GLB1P16278 677 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 CBSP35520 551 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 ACADVLP49748 655 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 SERPINB8P50452 374 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 IL2P60568 153 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 ZNF844Q08AG5 666 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 ILF2Q12905 390 aaKnown RBP14.4□□□□□ -0.1
COL9A3-209ENST00000469852 GRB7Q14451 532 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.4□□□□□ -0.1
COL9A3-209ENST00000469852 NEK10Q6ZWH5 1172 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 ZNF438Q7Z4V0 828 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 TDRPQ86YL5 185 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 LMNTD1Q8N9Z9 388 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 IFI44Q8TCB0 444 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 TBC1D10AQ9BXI6 508 aa14.4□□□□□ -0.1
COL9A3-209ENST00000469852 A0A1W2PPM1 405 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 TLDC2A0PJX2 215 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 NPEPPSL1A6NEC2 478 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 RHPN2P1A8MT19 583 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 ARHGEF33A8MVX0 844 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 EIF3FO00303 357 aaPredicted RBP14.39□□□□□ -0.11
COL9A3-209ENST00000469852 CDC7O00311 574 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 TNFSF14O43557 240 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 PSIP1O75475 530 aaKnown RBP14.39□□□□□ -0.11
COL9A3-209ENST00000469852 KRT37O76014 449 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 C1orf105O95561 183 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 CCDC166P0CW27 439 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 CSRP1P21291 193 aaKnown RBP14.39□□□□□ -0.11
COL9A3-209ENST00000469852 ACP1P24666 158 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 CNTFP26441 200 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 TYK2P29597 1187 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 RPIAP49247 311 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 OR1D5P58170 312 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 IFFO1Q0D2I5 559 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 NR1D2Q14995 579 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 TRIP6Q15654 476 aaKnown RBP14.39□□□□□ -0.11
COL9A3-209ENST00000469852 UNC5DQ6UXZ4 953 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 TMEM26Q6ZUK4 368 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 RAPH1Q70E73 1250 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 TAOK1Q7L7X3 1001 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 TBC1D21Q8IYX1 336 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 CENPLQ8N0S6 344 aaPredicted RBP14.39□□□□□ -0.11
COL9A3-209ENST00000469852 Q8N9G6 341 aaPredicted RBP14.39□□□□□ -0.11
COL9A3-209ENST00000469852 OR52E1Q8NGJ3 308 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 OR5K2Q8NHB8 316 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 KCTD4Q8WVF5 259 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 ASB11Q8WXH4 323 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 UBXN10Q96LJ8 280 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 CDC6Q99741 560 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 CCDC3Q9BQI4 270 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 KIR3DX1Q9H7L2 352 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 IGSF5Q9NSI5 407 aa14.39□□□□□ -0.11
COL9A3-209ENST00000469852 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.39□□□□□ -0.11
COL9A3-209ENST00000469852 TDRKHQ9Y2W6 561 aaKnown RBP14.39□□□□□ -0.11
COL9A3-209ENST00000469852 TPRP12270 2363 aaKnown RBP14.39□□□□□ -0.11
COL9A3-209ENST00000469852 ANKRD12Q6UB98 2062 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 A0A096LPK6 155 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 IQANK1A0A1B0GTG1 560 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 GFYI3L273 518 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 RASGRF2O14827 1237 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 B4GAT1O43505 415 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 ADRB1P08588 477 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 CD1DP15813 335 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 CRABP2P29373 138 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 RGS4P49798 205 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 CSHL1Q14406 222 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 KRT33BQ14525 404 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 RASA2Q15283 850 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 PHKG1Q16816 387 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 CCDC157Q569K6 752 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 NKAIN2Q5VXU1 208 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 TIFABQ6ZNK6 161 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 SPRED1Q7Z699 444 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 SLCO6A1Q86UG4 719 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 MYO1HQ8N1T3 1032 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 PLD6Q8N2A8 252 aaKnown RBP14.38□□□□□ -0.11
COL9A3-209ENST00000469852 NKAPQ8N5F7 415 aaKnown RBP14.38□□□□□ -0.11
COL9A3-209ENST00000469852 PDLIM5Q96HC4 596 aaKnown RBP14.38□□□□□ -0.11
COL9A3-209ENST00000469852 IL17FQ96PD4 163 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 MENTQ9BUN1 341 aa14.38□□□□□ -0.11
COL9A3-209ENST00000469852 TMEM109Q9BVC6 243 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms