RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PRMT7Q9NVM4 692 aaPredicted RBP7.81□□□□□ -1.16
TPM3-215ENST00000469717 MPP6Q9NZW5 540 aa7.81□□□□□ -1.16
TPM3-215ENST00000469717 FNDC3AQ9Y2H6 1198 aaKnown RBP7.81□□□□□ -1.16
TPM3-215ENST00000469717 PCDHGB6Q9Y5F9 930 aa7.81□□□□□ -1.16
TPM3-215ENST00000469717 PLXNA1Q9UIW2 1896 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 TMEM88BA6NKF7 163 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 CENPXA8MT69 81 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 H0Y626 953 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 H3BQ06 376 aaPredicted RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 M0R082 166 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 SOCS7O14512 581 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 TSPAN1O60635 241 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 B3GALNT1O75752 331 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 TRIM16O95361 564 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 SLC25A27O95847 323 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 IGFBP5P24593 272 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ADRA1AP35348 466 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 GNG2P59768 71 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 SNRPD2P62316 118 aaKnown RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 ITKQ08881 620 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ACOX1Q15067 660 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 GCNT7Q6ZNI0 430 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 CLEC20AQ6ZU45 233 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ZNF438Q7Z4V0 828 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 NECAB2Q7Z6G3 386 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 NLRP8Q86W28 1048 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 OR8H2Q8N162 312 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 GLB1L3Q8NCI6 653 aaPredicted RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 CHAC2Q8WUX2 184 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 RNF34Q969K3 372 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 REXO5Q96IC2 774 aaKnown RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 CHCHD6Q9BRQ6 235 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 COLEC11Q9BWP8 271 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ABCG8Q9H221 673 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 TMEM39AQ9NV64 488 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 FBXW11Q9UKB1 542 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 TBC1D24Q9ULP9 559 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 TMCC3Q9ULS5 477 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ABCG2Q9UNQ0 655 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ZNF451Q9Y4E5 1061 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 HAT1O14929 419 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 CPNE3O75131 537 aaKnown RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 TULP3O75386 442 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 PTTG1O95997 202 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 FGF4P08620 206 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 PRKACBP22694 351 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 HTR2BP41595 481 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 DAPP51397 102 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 CD83Q01151 205 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 CREMQ03060 361 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 SOX4Q06945 474 aaPredicted RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 DOC2BQ14184 412 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ZNF181Q2M3W8 571 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ZNF648Q5T619 568 aaPredicted RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 RANBP10Q6VN20 620 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 Q6ZSR9 355 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 PDZD4Q76G19 769 aaPredicted RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 ARHGAP12Q8IWW6 846 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ATPAF2Q8N5M1 289 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 NETO1Q8TDF5 533 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 SMIM14Q96QK8 99 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ATOH8Q96SQ7 321 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 MED10Q9BTT4 135 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 SLC39A8Q9C0K1 460 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ROGDIQ9GZN7 287 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 NUAK2Q9H093 628 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 RNF208Q9H0X6 261 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 PRKAG2Q9UGJ0 569 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 NUFIP1Q9UHK0 495 aaKnown RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 POLR3HQ9Y535 204 aaPredicted RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 PPP2R3BQ9Y5P8 575 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 PARP14Q460N5 1801 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 A0A0G2JMZ2 1700 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 LRRC37A2A6NM11 1700 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 hCG_2039718K7EN88 272 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 RGS10O43665 173 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 KATNA1O75449 491 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 C22orf31O95567 290 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 SERPINA1P01009 418 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 VIPP01282 170 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 HSMCR30P0CW71 290 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 WEE1P30291 646 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 CLCN5P51795 746 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 RBBP7Q16576 425 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 C9orf57Q5W0N0 161 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 CXCL17Q6UXB2 119 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ARMCX2Q7L311 632 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 TRIM48Q8IWZ4 208 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 B3GALNT2Q8NCR0 500 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 ZNF548Q8NEK5 533 aaPredicted RBP7.8□□□□□ -1.16
TPM3-215ENST00000469717 CHST13Q8NET6 341 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 DNASE1L2Q92874 299 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 WDCPQ9H6R7 721 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 SLC25A37Q9NYZ2 338 aa7.8□□□□□ -1.16
TPM3-215ENST00000469717 UBA6A0AVT1 1052 aaPredicted RBP7.79□□□□□ -1.16
TPM3-215ENST00000469717 ISPDA4D126 451 aa7.79□□□□□ -1.16
TPM3-215ENST00000469717 OR2A25A4D2G3 310 aa7.79□□□□□ -1.16
TPM3-215ENST00000469717 NPEPPSL1A6NEC2 478 aa7.79□□□□□ -1.16
TPM3-215ENST00000469717 CENPBD1B2RD01 187 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms