RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 WDR37Q9Y2I8 494 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 C2CD2Q9Y426 696 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 SESN1Q9Y6P5 492 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 IGSF1Q8N6C5 1336 aa3.65□□□□□ -1.83
VPS50-209ENST00000467326 PIK3R4Q99570 1358 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 LOC100509620A0A075B734 347 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 FAM237BA0A1B0GVD1 139 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 TRBC2A0A5B9 178 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 A4D1N5 150 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 URADA6NGE7 173 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 CYSRT1A8MQ03 144 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 BOLA2-SMG1P6H3BVE0 249 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 O00370 1275 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 SCAMP1O15126 338 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 BCAS2O75934 225 aaPredicted RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 RECQL5O94762 991 aaPredicted RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 GCNT3O95395 438 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 RB1P06400 928 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 HMOX1P09601 288 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 PDHBP11177 359 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 KRT5P13647 590 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 IL7RP16871 459 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 CASTP20810 708 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 TCEA1P23193 301 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 CORO1AP31146 461 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 BMXP51813 675 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 CAPZA1P52907 286 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 YBEYP58557 167 aaPredicted RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 TAS2R38P59533 333 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 STX1BP61266 288 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 PSMC6P62333 389 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 KCNJ10P78508 379 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 MRPS5P82675 430 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 CETN1Q12798 172 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 NPRL3Q12980 569 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 ITGA7Q13683 1181 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 SNTB1Q13884 538 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 IRF3Q14653 427 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 PCLAFQ15004 111 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 RBBP5Q15291 538 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 TRADDQ15628 312 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 KRTAP24-1Q3LI83 254 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 CXorf66Q5JRM2 361 aaPredicted RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 MPP7Q5T2T1 576 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 SIGIRRQ6IA17 410 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 TRNP1Q6NT89 227 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 TTI2Q6NXR4 508 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 TSSK4Q6SA08 328 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 MEX3BQ6ZN04 569 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 GSTA5Q7RTV2 222 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 PLPPR4Q7Z2D5 763 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 CACNA2D4Q7Z3S7 1137 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 HOOK3Q86VS8 718 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 CEP57Q86XR8 500 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 KMT5CQ86Y97 462 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS50-209ENST00000467326 ZNF34Q8IZ26 560 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 RNF113BQ8IZP6 322 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 MRPL43Q8N983 215 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 CNNM3Q8NE01 707 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 PSPC1Q8WXF1 523 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 ABTB1Q969K4 478 aaPredicted RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 FAM149B1Q96BN6 582 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 TUBGCP3Q96CW5 907 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 ORAI1Q96D31 301 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 RRNAD1Q96FB5 475 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 CFAP36Q96G28 342 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 GRAMD2BQ96HH9 432 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 PGAM5Q96HS1 289 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 RUFY1Q96T51 708 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 MTERF1Q99551 399 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 PCGF1Q9BSM1 259 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 ANKRD2Q9GZV1 360 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 SLC5A7Q9GZV3 580 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 RPAP3Q9H6T3 665 aaPredicted RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 SEBOXQ9HB31 216 aaPredicted RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 SDF2L1Q9HCN8 221 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 LTB4R2Q9NPC1 389 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 UTP6Q9NYH9 597 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 MDFICQ9P1T7 246 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 ABI3Q9P2A4 366 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 AMACRQ9UHK6 382 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 OSGIN1Q9UJX0 560 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 POU2F3Q9UKI9 436 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 CFAP45Q9UL16 551 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 MTMR6Q9Y217 621 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 TMED5Q9Y3A6 229 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 ATP8B3O60423 1300 aa3.64□□□□□ -1.83
VPS50-209ENST00000467326 PDS5AQ29RF7 1337 aaKnown RBP3.64□□□□□ -1.83
VPS50-209ENST00000467326 TCRBV21S2A2A0A5A6 115 aa3.63□□□□□ -1.83
VPS50-209ENST00000467326 FRMD3A2A2Y4 597 aa3.63□□□□□ -1.83
VPS50-209ENST00000467326 FAM172BPA6NC97 362 aa3.63□□□□□ -1.83
VPS50-209ENST00000467326 C16orf97H3BN30 126 aa3.63□□□□□ -1.83
VPS50-209ENST00000467326 SPINT2O43291 252 aa3.63□□□□□ -1.83
VPS50-209ENST00000467326 NKX2-2O95096 273 aa3.63□□□□□ -1.83
VPS50-209ENST00000467326 ADCY5O95622 1261 aa3.63□□□□□ -1.83
VPS50-209ENST00000467326 IFNB1P01574 187 aa3.63□□□□□ -1.83
VPS50-209ENST00000467326 CRYAAP02489 173 aa3.63□□□□□ -1.83
VPS50-209ENST00000467326 ATP1A1P05023 1023 aaKnown RBP3.63□□□□□ -1.83
VPS50-209ENST00000467326 MYOD1P15172 320 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms