RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 SPINT3P49223 89 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 AP2B1P63010 937 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 IL10RBQ08334 325 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 DEFB110Q30KQ9 67 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 KIAA0930Q6ICG6 404 aaPredicted RBP12.07□□□□□ -0.48
UBR4-210ENST00000466969 NEK10Q6ZWH5 1172 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 SLFN11Q7Z7L1 901 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 HOOK3Q86VS8 718 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 TRAPPC5Q8IUR0 188 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 ZNF547Q8IVP9 402 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 RPRMLQ8N4K4 120 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 EMC1Q8N766 993 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 TMEM178AQ8NBL3 297 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 DLG3Q92796 817 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 NTAN1Q96AB6 310 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 TMEM125Q96AQ2 219 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 TMX3Q96JJ7 454 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 SPATA16Q9BXB7 569 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 PITPNM3Q9BZ71 974 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 DEF6Q9H4E7 631 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 LRTM1Q9HBL6 345 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 HRH3Q9Y5N1 445 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 ALG6Q9Y672 507 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 CFAP20Q9Y6A4 193 aaKnown RBP12.07□□□□□ -0.48
UBR4-210ENST00000466969 A0A1B0GTH9 108 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 SERINC4A6NH21 518 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 TP53P04637 393 aaPredicted RBP12.06□□□□□ -0.48
UBR4-210ENST00000466969 PDHA1P08559 390 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 CD46P15529 392 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 PTGER1P34995 402 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 TMPRSS15P98073 1019 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 SLC10A7Q0GE19 358 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 ENOSF1Q7L5Y1 443 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 ARCQ7LC44 396 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 STRADAQ7RTN6 431 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 OR5M3Q8NGP4 307 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 DENND1AQ8TEH3 1009 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 PIGTQ969N2 578 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 PIP5K1AQ99755 562 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 TSG101Q99816 390 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 MESP1Q9BRJ9 268 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 PDCL3Q9H2J4 239 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 KIR3DX1Q9H7L2 352 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 MPDZO75970 2070 aa12.06□□□□□ -0.48
UBR4-210ENST00000466969 PHF3Q92576 2039 aaKnown RBP12.05□□□□□ -0.48
UBR4-210ENST00000466969 A0A1B0GX78 115 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 DFFAO00273 331 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 MTX2O75431 263 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 FAM157CP0CG43 387 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 ARSEP51690 589 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 FKBP3Q00688 224 aaKnown RBP12.05□□□□□ -0.48
UBR4-210ENST00000466969 KRTAP1-1Q07627 177 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 GTF2H3Q13889 308 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 KRT33BQ14525 404 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 SLC25A35Q3KQZ1 300 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 TTLL10Q6ZVT0 673 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.05□□□□□ -0.48
UBR4-210ENST00000466969 AMZ2Q86W34 360 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 TMTC1Q8IUR5 882 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 BBS5Q8N3I7 341 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 TMEM35BQ8NCS4 154 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 CCHCR1Q8TD31 782 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 GLYATL1Q969I3 302 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 HES7Q9BYE0 225 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 MGAM2Q2M2H8 2515 aa12.05□□□□□ -0.48
UBR4-210ENST00000466969 C1orf232A0A0U1RR37 186 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 GTPBP10A4D1E9 387 aaKnown RBP12.04□□□□□ -0.48
UBR4-210ENST00000466969 RGSL1A5PLK6 1076 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 CELA2AP08217 269 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 ITGAMP11215 1152 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 COX6A1P12074 109 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 CXCR2P25025 360 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 RFC1P35251 1148 aaPredicted RBP12.04□□□□□ -0.48
UBR4-210ENST00000466969 ARSFP54793 590 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 CCDC14Q49A88 953 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 VWA3BQ502W6 1294 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 RALGPS1Q5JS13 557 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 ARHGAP36Q6ZRI8 547 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 GALNTL5Q7Z4T8 443 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 WDR53Q7Z5U6 358 aaPredicted RBP12.04□□□□□ -0.48
UBR4-210ENST00000466969 C19orf47Q8N9M1 422 aaKnown RBP12.04□□□□□ -0.48
UBR4-210ENST00000466969 MSANTD4Q8NCY6 345 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 RXFP2Q8WXD0 754 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 LRRC46Q96FV0 321 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 PERPQ96FX8 193 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 SCMH1Q96GD3 660 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 C12orf66Q96MD2 445 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 SIGLEC12Q96PQ1 595 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 SRMSQ9H3Y6 488 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 FAM60AQ9NP50 221 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 METTL5Q9NRN9 209 aaKnown RBP12.04□□□□□ -0.48
UBR4-210ENST00000466969 RIC8BQ9NVN3 520 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 DTLQ9NZJ0 730 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 CTSFQ9UBX1 484 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 COLEC10Q9Y6Z7 277 aa12.04□□□□□ -0.48
UBR4-210ENST00000466969 FAM170AA1A519 330 aa12.03□□□□□ -0.48
UBR4-210ENST00000466969 BECN2A8MW95 431 aa12.03□□□□□ -0.48
UBR4-210ENST00000466969 TLX2O43763 284 aaPredicted RBP12.03□□□□□ -0.48
UBR4-210ENST00000466969 CDC40O60508 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
UBR4-210ENST00000466969 GOSR1O95249 250 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms