RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 GTF3AQ92664 365 aaKnown RBP2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 TBATAQ96M53 351 aa2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 C16orf70Q9BSU1 422 aa2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 TRIM6Q9C030 488 aaPredicted RBP2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 PPIL3Q9H2H8 161 aaKnown RBP2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 DNAJC18Q9H819 358 aa2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 AMACRQ9UHK6 382 aa2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 ZDHHC2Q9UIJ5 367 aa2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 WDR37Q9Y2I8 494 aa2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 CMAHPQ9Y471 501 aa2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 ANGPTL3Q9Y5C1 460 aa2.44□□□□□ -2.02
GTF3C3-209ENST00000466862 FRMD3A2A2Y4 597 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 KPNA7A9QM74 516 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 ZNF195O14628 629 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 OR10H2O60403 315 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 PRKRAO75569 313 aaKnown RBP2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 CREG1O75629 220 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 AGR2O95994 175 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 TMEM11P17152 192 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 RBMS1P29558 406 aaKnown RBP2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 TM4SF1P30408 202 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 LEPRP48357 1165 aaKnown RBP2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 LY6DQ14210 128 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 MELKQ14680 651 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 NECTIN1Q15223 517 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 TAF13Q15543 124 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 HLA-BQ31612 363 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 ARID3BQ8IVW6 561 aaPredicted RBP2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 KIRREL3Q8IZU9 778 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 C17orf47Q8NEP4 570 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 RNF128Q8TEB7 428 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 CENPTQ96BT3 561 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 ERLEC1Q96DZ1 483 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 NSL1Q96IY1 281 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 C7orf26Q96N11 449 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 TRAF4Q9BUZ4 470 aaPredicted RBP2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 C1QTNF1Q9BXJ1 281 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 OSER1Q9NX31 292 aa2.43□□□□□ -2.02
GTF3C3-209ENST00000466862 ABCA7Q8IZY2 2146 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 C15orf61A6NNL5 157 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 CDRT15L2A8MXV6 281 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 SRRM5B3KS81 715 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 BCL2L11O43521 198 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 HS6ST1O60243 411 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 GPC4O75487 556 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 DFFBO76075 338 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 TPPPO94811 219 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 NXPH2O95156 264 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 DDX58O95786 925 aaKnown RBP2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 TBX18O95935 607 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 IGHV4-31P0DP07 118 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 LAMP2P13473 410 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 MMP12P39900 470 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 PTGER3P43115 390 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 LIMK2P53671 638 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 HUNKP57058 714 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 IKQ13123 557 aaPredicted RBP2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 RAPSNQ13702 412 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 SMC5Q8IY18 1101 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 CEP57L1Q8IYX8 460 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 OR13J1Q8NGT2 312 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 SLCO2A1Q92959 643 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 PRICKLE1Q96MT3 831 aaPredicted RBP2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 USP28Q96RU2 1077 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 RAB11FIP5Q9BXF6 653 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 UPF3AQ9H1J1 476 aaKnown RBP2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 PDCL3Q9H2J4 239 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 MOB4Q9Y3A3 225 aa2.42□□□□□ -2.02
GTF3C3-209ENST00000466862 MPTX1A8MV57 137 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 EIF5BO60841 1220 aaKnown RBP2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 WDPCPO95876 746 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 CCR10P46092 362 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 PGFP49763 221 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 DMPKQ09013 629 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 ELAVL2Q12926 359 aaKnown RBP2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 PLA2G7Q13093 441 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 SLC25A53Q5H9E4 307 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 SNX30Q5VWJ9 437 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 BTN2A1Q7KYR7 527 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 MCEMP1Q8IX19 187 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 SMAP1Q8IYB5 467 aaPredicted RBP2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 Q8NBF4 154 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 OR10G8Q8NGN5 311 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 TDRD7Q8NHU6 1098 aaKnown RBP2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 ZNF519Q8TB69 540 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 SMAP2Q8WU79 429 aaPredicted RBP2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 MTERF3Q96E29 417 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 FAM81BQ96LP2 452 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 CEP295NLQ96MC4 621 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 SEC62Q99442 399 aaKnown RBP2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 SOSTQ9BQB4 213 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 SRSF8Q9BRL6 282 aaKnown RBP2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 ITPAQ9BY32 194 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 KAT14Q9H8E8 782 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 TAS2R14Q9NYV8 317 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 PNMA2Q9UL42 364 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 EXO1Q9UQ84 846 aaKnown RBP2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 PCDHGA5Q9Y5G8 931 aa2.41□□□□□ -2.02
GTF3C3-209ENST00000466862 SESN1Q9Y6P5 492 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms