RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 KCNJ10P78508 379 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 PMP22Q01453 160 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 PRKCZQ05513 592 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 TAF13Q15543 124 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 ARHGAP11AQ6P4F7 1023 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 CORO6Q6QEF8 472 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 GCNAQ96QF7 691 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 LITAFQ99732 161 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 EQTNQ9NQ60 294 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 ZNF701Q9NV72 531 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-205ENST00000464541 DDX25Q9UHL0 483 aaKnown RBP5.4□□□□□ -1.54
PTCD3-205ENST00000464541 KCNJ14Q9UNX9 436 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 HYKKA2RU49 373 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 SYNDIG1LA6NDD5 238 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 SLCO1B7G3V0H7 640 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 SH2B2O14492 632 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-205ENST00000464541 GAPDHSO14556 408 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-205ENST00000464541 ERAL1O75616 437 aaKnown RBP5.39□□□□□ -1.55
PTCD3-205ENST00000464541 EFNA1P20827 205 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-205ENST00000464541 CDH11P55287 796 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 SNAPC1Q16533 368 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 CEP85LQ5SZL2 805 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 TMEM211Q6ICI0 200 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 FAM53AQ6NSI3 398 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-205ENST00000464541 TMPRSS11FQ6ZWK6 438 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 COMMD2Q86X83 199 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 TRIML1Q8N9V2 468 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 AVL9Q8NBF6 648 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 CCDC107Q8WV48 283 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 ATL1Q8WXF7 558 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 NSL1Q96IY1 281 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 FSD1Q9BTV5 496 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 SIX2Q9NPC8 291 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 SLC35C2Q9NQQ7 365 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 OSER1Q9NX31 292 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 DDX43Q9NXZ2 648 aaKnown RBP5.39□□□□□ -1.55
PTCD3-205ENST00000464541 DPP3Q9NY33 737 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 ZDHHC2Q9UIJ5 367 aa5.39□□□□□ -1.55
PTCD3-205ENST00000464541 IGHV4-61A0A0C4DH41 118 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 TCRBV21S2A2A0A5A6 115 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 PSMD14O00487 310 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 ATP6V0E1O15342 81 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 ADAM20O43506 726 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 EML2O95834 649 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 WDPCPO95876 746 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 IGHV4-59P01825 116 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 EDN1P05305 212 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 ABCB1P08183 1280 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-205ENST00000464541 DANCRP0C864 163 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 PDX1P52945 283 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 GNB1P62873 340 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 CFAP58Q5T655 872 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 GPR139Q6DWJ6 353 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 C15orf39Q6ZRI6 1047 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 FAM114A1Q8IWE2 563 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 CEP57L1Q8IYX8 460 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 OR5M8Q8NGP6 311 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 GRHL3Q8TE85 626 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 SLAMF9Q96A28 289 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 PTERQ96BW5 349 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 ARSGQ96EG1 525 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 LRR1Q96L50 414 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 DGAT2Q96PD7 388 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 ABHD1Q96SE0 405 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 ASCL2Q99929 193 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 TRAF4Q9BUZ4 470 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-205ENST00000464541 SPHK1Q9NYA1 384 aa5.38□□□□□ -1.55
PTCD3-205ENST00000464541 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 IGLV9-49A0A0B4J1Y8 123 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 hCG_1809904A0A1W2PP81 198 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 A0A1W2PPE2 198 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 A0A1W2PR64 198 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 TMEM221A6NGB7 291 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 HHLA1C9JL84 531 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 PLOD2O00469 737 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 LINGO3P0C6S8 592 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 FRMD6-AS1P0C7T7 363 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 FAM157CP0CG43 387 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 PFKFB1P16118 471 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 GNB3P16520 340 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 CEACAM8P31997 349 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-205ENST00000464541 ATP12AP54707 1039 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 IFI35P80217 286 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-205ENST00000464541 HSPB3Q12988 150 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 KIF26BQ2KJY2 2108 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 RNASEH2BQ5TBB1 312 aaKnown RBP5.37□□□□□ -1.55
PTCD3-205ENST00000464541 SH2D5Q6ZV89 423 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 ENOSF1Q7L5Y1 443 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 POMGNT2Q8NAT1 580 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 TMEM143Q96AN5 459 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 GIMAP5Q96F15 307 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 OLFM1Q99784 485 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 APOL6Q9BWW8 343 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 PITPNM3Q9BZ71 974 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 ANAPC2Q9UJX6 822 aa5.37□□□□□ -1.55
PTCD3-205ENST00000464541 LOC101059948A0A1B0GTJ6 334 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 DNM1LO00429 736 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 NADKO95544 446 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-205ENST00000464541 CA6P23280 308 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 MTHFRP42898 656 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms