RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 PGLSO95336 258 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 CRTAMO95727 393 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 JUNP05412 331 aaKnown RBP5.31□□□□□ -1.56
CD46-211ENST00000464082 HLA-DQB2P05538 268 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 DESP17661 470 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 KDELR1P24390 212 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 SERPINA4P29622 427 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 GJC1P36383 396 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 TRIM23P36406 574 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 HSPA9P38646 679 aaKnown RBP5.31□□□□□ -1.56
CD46-211ENST00000464082 MMP13P45452 471 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 MARCKSL1P49006 195 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 PDX1P52945 283 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 HADHBP55084 474 aaKnown RBP5.31□□□□□ -1.56
CD46-211ENST00000464082 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
CD46-211ENST00000464082 HNRNPKP61978 463 aaKnown RBP eCLIP5.31□□□□□ -1.56
CD46-211ENST00000464082 YPEL5P62699 121 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 DSC2Q02487 901 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 ADCY2Q08462 1091 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 ELP6Q0PNE2 266 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 ZBTB17Q13105 803 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 ILKQ13418 452 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 C1orf61Q13536 156 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 MESDQ14696 234 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 NFATC4Q14934 902 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 CDKN3Q16667 212 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 INAVAQ3KP66 663 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 CCDC157Q569K6 752 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 ESRP1Q6NXG1 681 aaKnown RBP5.31□□□□□ -1.56
CD46-211ENST00000464082 GUSBP11Q6P575 273 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 NPNTQ6UXI9 565 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 HSD11B1LQ7Z5J1 315 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 TMPRSS12Q86WS5 348 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 SLC35F3Q8IY50 421 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 CMTM4Q8IZR5 234 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 ATPAF2Q8N5M1 289 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 CNTD1Q8N815 330 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 DCBLD1Q8N8Z6 715 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 CXorf40AQ8TE69 158 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 CTNNBL1Q8WYA6 563 aaPredicted RBP5.31□□□□□ -1.56
CD46-211ENST00000464082 TSACCQ96A04 125 aaPredicted RBP5.31□□□□□ -1.56
CD46-211ENST00000464082 TADA1Q96BN2 335 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 EID2BQ96D98 161 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 HDAC11Q96DB2 347 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 PDXPQ96GD0 296 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 TBATAQ96M53 351 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 RNF157Q96PX1 679 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 WDR24Q96S15 920 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 IL12RB2Q99665 862 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 FOXB1Q99853 325 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 HERPUD2Q9BSE4 406 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 APOOQ9BUR5 198 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 ATP13A3Q9H7F0 1226 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 FGF22Q9HCT0 170 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 NT5MQ9NPB1 228 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 MRPL40Q9NQ50 206 aaKnown RBP5.31□□□□□ -1.56
CD46-211ENST00000464082 CTTNBP2NLQ9P2B4 639 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 OR1A2Q9Y585 309 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 PCYT1BQ9Y5K3 369 aaPredicted RBP5.31□□□□□ -1.56
CD46-211ENST00000464082 CSNK1G3Q9Y6M4 447 aa5.31□□□□□ -1.56
CD46-211ENST00000464082 A0A0J9YYE9 177 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 A0A0U1RQJ8 604 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 EME2A4GXA9 379 aaPredicted RBP5.3□□□□□ -1.56
CD46-211ENST00000464082 TMEM110-MUSTN1A8MSY1 372 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 A8MX80 341 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 AKR1B15C9JRZ8 316 aaPredicted RBP5.3□□□□□ -1.56
CD46-211ENST00000464082 LMO7DNF2Z398 122 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 TOR1BO14657 336 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 TPP1O14773 563 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 YY2O15391 372 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 AQP9O43315 295 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 AKR1B10O60218 316 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 OPA1O60313 960 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 TRBC1P01850 177 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 PCCBP05166 539 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 HOXC4P09017 264 aaPredicted RBP5.3□□□□□ -1.56
CD46-211ENST00000464082 ALPIP09923 528 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 ELFN1P0C7U0 828 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 TSHRP16473 764 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 CTPS1P17812 591 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 TGM2P21980 687 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 CCNCP24863 283 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 APOBEC3AP31941 199 aaPredicted RBP5.3□□□□□ -1.56
CD46-211ENST00000464082 SERPINB6P35237 376 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 ARHGAP25P42331 645 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 PEX5P50542 639 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 RENBPP51606 427 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 HK3P52790 923 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 KIAA1024LP59773 190 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 BCL2L1Q07817 233 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 PPIDQ08752 370 aaKnown RBP5.3□□□□□ -1.56
CD46-211ENST00000464082 TARDBPQ13148 414 aaKnown RBP eCLIP5.3□□□□□ -1.56
CD46-211ENST00000464082 SGCGQ13326 291 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 MTM1Q13496 603 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 KRT81Q14533 505 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 ZNF235Q14590 738 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 PDK2Q15119 407 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 HADHQ16836 314 aaKnown RBP5.3□□□□□ -1.56
CD46-211ENST00000464082 DEFB133Q30KQ1 61 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 MARC1Q5VT66 337 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms