RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 C19orf47Q8N9M1 422 aaKnown RBP13.98□□□□□ -0.17
SMC1A-204ENST00000463684 PHC3Q8NDX5 983 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 OR52E1Q8NGJ3 308 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 HM13Q8TCT9 377 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 NAT14Q8WUY8 206 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 CPLX3Q8WVH0 158 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 SYN2Q92777 582 aaPredicted RBP13.98□□□□□ -0.17
SMC1A-204ENST00000463684 RELTQ969Z4 430 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 OLFM3Q96PB7 478 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 NAT10Q9H0A0 1025 aaKnown RBP13.98□□□□□ -0.17
SMC1A-204ENST00000463684 ASB8Q9H765 288 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 MVB12BQ9H7P6 319 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 LMBRD1Q9NUN5 540 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 UVRAGQ9P2Y5 699 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 DHCR7Q9UBM7 475 aaKnown RBP13.98□□□□□ -0.17
SMC1A-204ENST00000463684 FBXL4Q9UKA2 621 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 ITGB1BP2Q9UKP3 347 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 KLF2Q9Y5W3 355 aaPredicted RBP13.98□□□□□ -0.17
SMC1A-204ENST00000463684 C17orf113A0A1B0GUU1 675 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 ZSCAN9O15535 394 aaPredicted RBP13.97□□□□□ -0.17
SMC1A-204ENST00000463684 JRKO75564 520 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 UMODP07911 640 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 NFKB1P19838 968 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 PTGER4P35408 488 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 DEFB110Q30KQ9 67 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 FIGNQ5HY92 759 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 TLDC1Q6P9B6 456 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 SPESP1Q6UW49 350 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 BZW1Q7L1Q6 419 aaKnown RBP13.97□□□□□ -0.17
SMC1A-204ENST00000463684 VSIG1Q86XK7 387 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 ADGRF3Q8IZF5 1079 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 ZNF655Q8N720 491 aaPredicted RBP13.97□□□□□ -0.17
SMC1A-204ENST00000463684 BCORP1Q8N888 145 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 LURAP1Q96LR2 239 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 NDC1Q9BTX1 674 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 XKR8Q9H6D3 395 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 FAM60AQ9NP50 221 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 SLC6A20Q9NP91 592 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 CHST11Q9NPF2 352 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 OLAHQ9NV23 265 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 CDC23Q9UJX2 597 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 PIKFYVEQ9Y2I7 2098 aa13.97□□□□□ -0.17
SMC1A-204ENST00000463684 C2orf81A6NN90 581 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 SMTNL1A8MU46 457 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 CFAP99D6REC4 459 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 H3BMH7 237 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 CNOT3O75175 753 aaKnown RBP13.96□□□□□ -0.17
SMC1A-204ENST00000463684 SRP72O76094 671 aaKnown RBP13.96□□□□□ -0.17
SMC1A-204ENST00000463684 H2AFZP0C0S5 128 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 ALAS2P22557 587 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 MMP11P24347 488 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 CD68P34810 354 aaPredicted RBP13.96□□□□□ -0.17
SMC1A-204ENST00000463684 CD151P48509 253 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 PRLHRP49683 370 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 FOXL2P58012 376 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 DYNLT1P63172 113 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 PRKG2Q13237 762 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 PTPRCAPQ14761 206 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 H2AFVQ71UI9 128 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 IPMKQ8NFU5 416 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 TFB1MQ8WVM0 346 aaKnown RBP13.96□□□□□ -0.17
SMC1A-204ENST00000463684 CTNNBL1Q8WYA6 563 aaPredicted RBP13.96□□□□□ -0.17
SMC1A-204ENST00000463684 VPS50Q96JG6 964 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 MRGPRX2Q96LB1 330 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 NAP1L5Q96NT1 182 aaPredicted RBP13.96□□□□□ -0.17
SMC1A-204ENST00000463684 NRTNQ99748 197 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 SLX1AQ9BQ83 275 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 LHPPQ9H008 270 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 SUCOQ9UBS9 1254 aaKnown RBP13.96□□□□□ -0.17
SMC1A-204ENST00000463684 CRLS1Q9UJA2 301 aa13.96□□□□□ -0.17
SMC1A-204ENST00000463684 A0A1B0GTH6 734 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 C3orf70A6NLC5 250 aaPredicted RBP13.95□□□□□ -0.18
SMC1A-204ENST00000463684 SGTAO43765 313 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 ALOX12BO75342 701 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 PIM1P11309 404 aaPredicted RBP13.95□□□□□ -0.18
SMC1A-204ENST00000463684 ATP1B2P14415 290 aaPredicted RBP13.95□□□□□ -0.18
SMC1A-204ENST00000463684 COX6B1P14854 86 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 NR2C2P49116 596 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 OTUD4Q01804 1114 aaKnown RBP13.95□□□□□ -0.18
SMC1A-204ENST00000463684 MPP3Q13368 585 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 MESDQ14696 234 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 PRKD1Q15139 912 aaPredicted RBP13.95□□□□□ -0.18
SMC1A-204ENST00000463684 RPUSD3Q6P087 351 aaKnown RBP13.95□□□□□ -0.18
SMC1A-204ENST00000463684 PID1Q7Z2X4 250 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 TRIM73Q86UV7 250 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 NXPE1Q8N323 547 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 OR4K2Q8NGD2 314 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 DENND1AQ8TEH3 1009 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 HEXDCQ8WVB3 486 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 TFGQ92734 400 aaPredicted RBP13.95□□□□□ -0.18
SMC1A-204ENST00000463684 DLG3Q92796 817 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 ULK4Q96C45 1275 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 FCRL5Q96RD9 977 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 HGH1Q9BTY7 390 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 FSD1LQ9BXM9 530 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 CHRNA10Q9GZZ6 450 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 OR52A5Q9H2C5 316 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 COG4Q9H9E3 785 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 VPS37BQ9H9H4 285 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 KLHL8Q9P2G9 620 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms