RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 RANBP10Q6VN20 620 aa20.07■□□□□ 0.8
CPSF7-209ENST00000463244 AMIGO1Q86WK6 493 aa20.07■□□□□ 0.8
CPSF7-209ENST00000463244 NXPE1Q8N323 547 aa20.07■□□□□ 0.8
CPSF7-209ENST00000463244 ULK4Q96C45 1275 aa20.07■□□□□ 0.8
CPSF7-209ENST00000463244 HAUS1Q96CS2 278 aa20.07■□□□□ 0.8
CPSF7-209ENST00000463244 GBA3Q9H227 469 aa20.07■□□□□ 0.8
CPSF7-209ENST00000463244 ZNF552Q9H707 407 aaPredicted RBP20.07■□□□□ 0.8
CPSF7-209ENST00000463244 MVB12BQ9H7P6 319 aa20.07■□□□□ 0.8
CPSF7-209ENST00000463244 SPTLC3Q9NUV7 552 aa20.07■□□□□ 0.8
CPSF7-209ENST00000463244 HACD1B0YJ81 288 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 CFAP99D6REC4 459 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 IFRD1O00458 451 aaPredicted RBP20.06■□□□□ 0.8
CPSF7-209ENST00000463244 PSTPIP1O43586 416 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 KLHL41O60662 606 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 IGHEP01854 428 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 CBSLP0DN79 551 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 CBSP35520 551 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 CD151P48509 253 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 GEMP55040 296 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 TCEAL1Q15170 157 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 TFDP3Q5H9I0 405 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 NUP210LQ5VU65 1888 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 RHBDD2Q6NTF9 364 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 SPESP1Q6UW49 350 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 OTOGQ6ZRI0 2925 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 OR13C4Q8NGS5 318 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 HEXDCQ8WVB3 486 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 GBP5Q96PP8 586 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 COPS8Q99627 209 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 ANP32EQ9BTT0 268 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 ILKAPQ9H0C8 392 aaPredicted RBP20.06■□□□□ 0.8
CPSF7-209ENST00000463244 FAM60AQ9NP50 221 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 ACTR10Q9NZ32 417 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 PTRH2Q9Y3E5 179 aaKnown RBP20.06■□□□□ 0.8
CPSF7-209ENST00000463244 AP1M2Q9Y6Q5 423 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 ZGRF1Q86YA3 2104 aa20.06■□□□□ 0.8
CPSF7-209ENST00000463244 ANKRD17O75179 2603 aaKnown RBP20.05■□□□□ 0.8
CPSF7-209ENST00000463244 hCG_1818297A0A087WSY0 165 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 GOLGA6L19H0YKK7 550 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 PEX12O00623 359 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 ANXA9O76027 345 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 ITGALP20701 1170 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 PDHA2P29803 388 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 ADRA1AP35348 466 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 FOLR3P41439 243 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 MSLNQ13421 630 aaPredicted RBP20.05■□□□□ 0.8
CPSF7-209ENST00000463244 OLIG2Q13516 323 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 ELOAQ14241 798 aaKnown RBP20.05■□□□□ 0.8
CPSF7-209ENST00000463244 SNX20Q7Z614 316 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 C19orf47Q8N9M1 422 aaKnown RBP20.05■□□□□ 0.8
CPSF7-209ENST00000463244 TTC13Q8NBP0 860 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 PHC3Q8NDX5 983 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 OR2Y1Q8NGV0 311 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 CHP1Q99653 195 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 HGH1Q9BTY7 390 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 XKR8Q9H6D3 395 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 P4HTMQ9NXG6 502 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 GPN3Q9UHW5 284 aaPredicted RBP20.05■□□□□ 0.8
CPSF7-209ENST00000463244 PCDHGA10Q9Y5H3 936 aa20.05■□□□□ 0.8
CPSF7-209ENST00000463244 COPG1Q9Y678 874 aaKnown RBP20.05■□□□□ 0.8
CPSF7-209ENST00000463244 IGLV3-16A0A075B6K0 115 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 SYCE3A1L190 88 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 HCRTR1O43613 425 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 OR2B3O76000 313 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 IPO13O94829 963 aaKnown RBP20.04■□□□□ 0.8
CPSF7-209ENST00000463244 ZNF140P52738 457 aaPredicted RBP20.04■□□□□ 0.8
CPSF7-209ENST00000463244 SOX8P57073 446 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 RPA4Q13156 261 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 PRKG2Q13237 762 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 BOP1Q14137 746 aaKnown RBP20.04■□□□□ 0.8
CPSF7-209ENST00000463244 C1orf189Q5VU69 101 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 Q6ZS92 163 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 PROKR1Q8TCW9 393 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 UBE2Q2Q8WVN8 375 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 TM9SF4Q92544 642 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 TFGQ92734 400 aaPredicted RBP20.04■□□□□ 0.8
CPSF7-209ENST00000463244 N4BP2L2Q92802 583 aaPredicted RBP20.04■□□□□ 0.8
CPSF7-209ENST00000463244 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.04■□□□□ 0.8
CPSF7-209ENST00000463244 C19orf43Q9BQ61 176 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 APOL2Q9BQE5 337 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 CHRNA10Q9GZZ6 450 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 FAM96AQ9H5X1 160 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 VPS37BQ9H9H4 285 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 NHEJ1Q9H9Q4 299 aaPredicted RBP20.04■□□□□ 0.8
CPSF7-209ENST00000463244 ZNHIT6Q9NWK9 470 aaKnown RBP20.04■□□□□ 0.8
CPSF7-209ENST00000463244 NTNG1Q9Y2I2 539 aa20.04■□□□□ 0.8
CPSF7-209ENST00000463244 CNOT3O75175 753 aaKnown RBP20.03■□□□□ 0.8
CPSF7-209ENST00000463244 CRTAMO95727 393 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 TPM3P06753 285 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 CD63P08962 238 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 RBL1P28749 1068 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 GABRA4P48169 554 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 DCDP81605 110 aaKnown RBP20.03■□□□□ 0.8
CPSF7-209ENST00000463244 ZIC1Q15915 447 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 DEFB110Q30KQ9 67 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 ITPRIPL1Q6GPH6 555 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 CUZD1Q86UP6 607 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 TRIM73Q86UV7 250 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 HOOK3Q86VS8 718 aa20.03■□□□□ 0.8
CPSF7-209ENST00000463244 ZADH2Q8N4Q0 377 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms