RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TRAPPC9Q96Q05 1148 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 PITPNM3Q9BZ71 974 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 OR52A5Q9H2C5 316 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 ARNT2Q9HBZ2 717 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 IRAK4Q9NWZ3 460 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 ACTR10Q9NZ32 417 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 MAP4K5Q9Y4K4 846 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 AP1M2Q9Y6Q5 423 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 PEX12O00623 359 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 CCL22O00626 93 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 LIN7AO14910 233 aaPredicted RBP14.91□□□□□ -0.02
SKA3-204ENST00000462482 ZNF749O43361 778 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 CEACAM4O75871 244 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 FTH1P02794 183 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 SHMT2P34897 504 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 CACNG1Q06432 222 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 BOP1Q14137 746 aaKnown RBP14.91□□□□□ -0.02
SKA3-204ENST00000462482 KYNUQ16719 465 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 PARP6Q2NL67 630 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 PTCHD3Q3KNS1 767 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 SYTL3Q4VX76 610 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 SPESP1Q6UW49 350 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 TC2NQ8N9U0 490 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 TTC13Q8NBP0 860 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 ADAMTS17Q8TE56 1095 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 TCTN2Q96GX1 697 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 TTC1Q99614 292 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 FAM118BQ9BPY3 351 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 MFRPQ9BY79 579 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 KLHL25Q9H0H3 589 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 XKR8Q9H6D3 395 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 LRRC40Q9H9A6 602 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 NLE1Q9NVX2 485 aaPredicted RBP14.91□□□□□ -0.02
SKA3-204ENST00000462482 SMARCAL1Q9NZC9 954 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 POLG2Q9UHN1 485 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 TFR2Q9UP52 801 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 ASF1AQ9Y294 204 aa14.91□□□□□ -0.02
SKA3-204ENST00000462482 LRRK2Q5S007 2527 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 IGLV3-16A0A075B6K0 115 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 H7C0S8 307 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 PSMD3O43242 534 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 LDB2O43679 373 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 OR2B3O76000 313 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 SORBS2O94875 1100 aaKnown RBP14.9□□□□□ -0.02
SKA3-204ENST00000462482 GAS8O95995 478 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 ALPPP05187 535 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 PVRP15151 417 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 PDHA2P29803 388 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 OTX2P32243 289 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 NSG1P42857 185 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 PLOD1Q02809 727 aaPredicted RBP14.9□□□□□ -0.02
SKA3-204ENST00000462482 INPP5JQ15735 1006 aaPredicted RBP14.9□□□□□ -0.02
SKA3-204ENST00000462482 P3H1Q32P28 736 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 MLIPQ5VWP3 458 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 DENND5AQ6IQ26 1287 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 LCN10Q6JVE6 187 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 JMJD6Q6NYC1 403 aaPredicted RBP14.9□□□□□ -0.02
SKA3-204ENST00000462482 FAM198BQ6UWH4 519 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 CDHR3Q6ZTQ4 885 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 CLDN19Q8N6F1 224 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 C19orf47Q8N9M1 422 aaKnown RBP14.9□□□□□ -0.02
SKA3-204ENST00000462482 GLIS1Q8NBF1 620 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 CLEC1AQ8NC01 280 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 FDCSPQ8NFU4 85 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 SSC4DQ8WTU2 575 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 STYXQ8WUJ0 223 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 FER1L6-AS2Q96M78 137 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 NDOR1Q9UHB4 597 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 FLNCQ14315 2725 aa14.9□□□□□ -0.02
SKA3-204ENST00000462482 BSNQ9UPA5 3926 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 TRBV5-4A0A0C4DH59 114 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 FOLR3P41439 243 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 MSLNQ13421 630 aaPredicted RBP14.89□□□□□ -0.03
SKA3-204ENST00000462482 ATP1A4Q13733 1029 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 ITIH4Q14624 930 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 POU6F1Q14863 301 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 TBC1D21Q8IYX1 336 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 ADGRF3Q8IZF5 1079 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 PIAS4Q8N2W9 510 aaPredicted RBP14.89□□□□□ -0.03
SKA3-204ENST00000462482 ZBTB2Q8N680 514 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 UBL4BQ8N7F7 174 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 ELMO1Q92556 727 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 PNPLA2Q96AD5 504 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 NUDT9Q9BW91 350 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 TXLNGQ9NUQ3 528 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 CUEDC1Q9NWM3 386 aaPredicted RBP14.89□□□□□ -0.03
SKA3-204ENST00000462482 C5AR2Q9P296 337 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 IFT80Q9P2H3 777 aaPredicted RBP14.89□□□□□ -0.03
SKA3-204ENST00000462482 PLEKHB1Q9UF11 243 aaPredicted RBP14.89□□□□□ -0.03
SKA3-204ENST00000462482 SRPK3Q9UPE1 567 aa14.89□□□□□ -0.03
SKA3-204ENST00000462482 TDRKHQ9Y2W6 561 aaKnown RBP14.89□□□□□ -0.03
SKA3-204ENST00000462482 EPN1Q9Y6I3 576 aaPredicted RBP14.89□□□□□ -0.03
SKA3-204ENST00000462482 CCDC78A2IDD5 438 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 CAPN1P07384 714 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 OR56A5P0C7T3 313 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 UGT2B7P16662 529 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 TPH1P17752 444 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 CDKN1CP49918 316 aaPredicted RBP14.88□□□□□ -0.03
SKA3-204ENST00000462482 DCDP81605 110 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms