RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 FFAR3O14843 346 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 GPR42O15529 346 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 TSPAN3O60637 253 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 CREG1O75629 220 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 SCELO95171 688 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 SERPINA1P01009 418 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 PRLP01236 227 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 ACVR2AP27037 513 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 HOXD9P28356 352 aaPredicted RBP18.1■□□□□ 0.49
HPS3-204ENST00000462030 AKT1P31749 480 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 MASP1P48740 699 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 YBEYP58557 167 aaPredicted RBP18.1■□□□□ 0.49
HPS3-204ENST00000462030 ACOX1Q15067 660 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 TRIP4Q15650 581 aaPredicted RBP18.1■□□□□ 0.49
HPS3-204ENST00000462030 ALG1LQ6GMV1 187 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 GPR149Q86SP6 731 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 ADCK1Q86TW2 530 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 LPCAT1Q8NF37 534 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 OR6Q1Q8NGQ2 317 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 NETO1Q8TDF5 533 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 YIPF6Q96EC8 236 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 ZBTB18Q99592 522 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 CORO1BQ9BR76 489 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 AP5M1Q9H0R1 490 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 IPPKQ9H8X2 491 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 FBXO8Q9NRD0 319 aa18.1■□□□□ 0.49
HPS3-204ENST00000462030 FARSBQ9NSD9 589 aaKnown RBP18.1■□□□□ 0.49
HPS3-204ENST00000462030 SLC12A8A0AV02 714 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 MYADML2A6NDP7 307 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 C2orf81A6NN90 581 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 ALOX5P09917 674 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 CD52P31358 61 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 TGFBR1P36897 503 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 HMGCS1Q01581 520 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 SIM2Q14190 667 aaPredicted RBP18.09■□□□□ 0.49
HPS3-204ENST00000462030 PCBP2Q15366 365 aaKnown RBP eCLIP18.09■□□□□ 0.49
HPS3-204ENST00000462030 NPTX1Q15818 432 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 DGUOKQ16854 277 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 RUNDC3AQ59EK9 446 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 ZNF362Q5T0B9 420 aaPredicted RBP18.09■□□□□ 0.49
HPS3-204ENST00000462030 DYNC2LI1Q8TCX1 351 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 ZNF300Q96RE9 604 aaPredicted RBP18.09■□□□□ 0.49
HPS3-204ENST00000462030 MARCH2Q9P0N8 246 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 PCDHB14Q9Y5E9 798 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 COMMD10Q9Y6G5 202 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 NRIP1P48552 1158 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 C10orf120Q5SQS8 335 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 CATSPEREQ5SY80 951 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 PLEKHG7Q6ZR37 379 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 FKBP9P1Q75LS8 142 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 P2RY8Q86VZ1 359 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 CYP4Z1Q86W10 505 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 LIX1Q8N485 282 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 EFHBQ8N7U6 833 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 MINDY2Q8NBR6 621 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 CLHC1Q8NHS4 586 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 KCNJ9Q92806 393 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 SGIP1Q9BQI5 828 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 NECTIN3Q9NQS3 549 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 ORC6Q9Y5N6 252 aa18.09■□□□□ 0.49
HPS3-204ENST00000462030 MOXD2PA6NHM9 499 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 B4GALT3O60512 393 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 PGRP06401 933 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 PSMB9P28065 219 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 HSPA7P48741 367 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 MAPKAPK2P49137 400 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 TTPAP49638 278 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 IL1RL1Q01638 556 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 SBSNQ6UWP8 590 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 MILR1Q7Z6M3 343 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 CCDC97Q96F63 343 aaPredicted RBP18.08■□□□□ 0.49
HPS3-204ENST00000462030 REXO5Q96IC2 774 aaKnown RBP18.08■□□□□ 0.49
HPS3-204ENST00000462030 PPP3R2Q96LZ3 170 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 YIPF2Q9BWQ6 316 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 DPY30Q9C005 99 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 KLHL25Q9H0H3 589 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 RIBC2Q9H4K1 309 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 FBXO44Q9H4M3 255 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 SCUBE2Q9NQ36 999 aa18.08■□□□□ 0.49
HPS3-204ENST00000462030 CHD5Q8TDI0 1954 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 ZBBXA8MT70 800 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 GUCA1CO95843 209 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 ITGAMP11215 1152 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 TYMPP19971 482 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 LPOP22079 712 aaPredicted RBP18.08■□□□□ 0.48
HPS3-204ENST00000462030 IGFBP5P24593 272 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 CLCN7P51798 805 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 SLC35A2P78381 396 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 IL18R1Q13478 541 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 HIST2H2ACQ16777 129 aaPredicted RBP18.08■□□□□ 0.48
HPS3-204ENST00000462030 VARS2Q5ST30 1063 aaKnown RBP18.08■□□□□ 0.48
HPS3-204ENST00000462030 GDF6Q6KF10 455 aaPredicted RBP18.08■□□□□ 0.48
HPS3-204ENST00000462030 SLC22A16Q86VW1 577 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 OR52E4Q8NGH9 312 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 RPL3LQ92901 407 aaKnown RBP18.08■□□□□ 0.48
HPS3-204ENST00000462030 CINPQ9BW66 212 aaPredicted RBP18.08■□□□□ 0.48
HPS3-204ENST00000462030 NSUN3Q9H649 340 aaKnown RBP18.08■□□□□ 0.48
HPS3-204ENST00000462030 KAT8Q9H7Z6 458 aaKnown RBP18.08■□□□□ 0.48
HPS3-204ENST00000462030 SCHIP1Q9P0W5 487 aaPredicted RBP18.08■□□□□ 0.48
HPS3-204ENST00000462030 KLQ9UEF7 1012 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms