RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 IRAK1BP1Q5VVH5 260 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 ADCY4Q8NFM4 1077 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 SKA2Q8WVK7 121 aaPredicted RBP19.78■□□□□ 0.76
CCM2-203ENST00000461377 ELMO1Q92556 727 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 USP7Q93009 1102 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 ZUFSPQ96AP4 578 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 HIST1H2AHQ96KK5 128 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 ASB16Q96NS5 453 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 HIST1H2AJQ99878 128 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 H2AFJQ9BTM1 129 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 FARSBQ9NSD9 589 aaKnown RBP19.78■□□□□ 0.76
CCM2-203ENST00000461377 AP4S1Q9Y587 144 aa19.78■□□□□ 0.76
CCM2-203ENST00000461377 QSOX1O00391 747 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 ULK1O75385 1050 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 SMNDC1O75940 238 aaKnown RBP eCLIP19.77■□□□□ 0.76
CCM2-203ENST00000461377 CLDN9O95484 217 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 STAMBPO95630 424 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 ELFN1P0C7U0 828 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 UQCRBP14927 111 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 CYP2A7P20853 494 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 LDLRAP1Q5SW96 308 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 ZNF648Q5T619 568 aaPredicted RBP19.77■□□□□ 0.76
CCM2-203ENST00000461377 CYP2R1Q6VVX0 501 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 NRSN1Q8IZ57 195 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 CATSPER1Q8NEC5 780 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 SLCO4A1Q96BD0 722 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 ZFYVE19Q96K21 471 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 BTBD9Q96Q07 612 aa19.77■□□□□ 0.76
CCM2-203ENST00000461377 ZNF490Q9ULM2 529 aaPredicted RBP19.77■□□□□ 0.76
CCM2-203ENST00000461377 PSMD11O00231 422 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 NPPAP01160 153 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 PRNPP04156 253 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 SLC2A4P14672 509 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 ATP6V1B2P21281 511 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 JAK1P23458 1154 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 SLC7A1P30825 629 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 GRIN2CQ14957 1233 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 DUSP6Q16828 381 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 DPP10Q8N608 796 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 BEND7Q8N7W2 519 aaPredicted RBP19.77■□□□□ 0.75
CCM2-203ENST00000461377 OR2T34Q8NGX1 318 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 OR2T3Q8NH03 318 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 ASZ1Q8WWH4 475 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 SMARCD2Q92925 531 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 GLYATL1Q969I3 302 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 ITM2BQ9Y287 266 aa19.77■□□□□ 0.75
CCM2-203ENST00000461377 MAGEA13PA6NCF6 341 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 ARNTLO00327 626 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 IFRD1O00458 451 aaPredicted RBP19.76■□□□□ 0.75
CCM2-203ENST00000461377 KPNA3O00505 521 aaPredicted RBP19.76■□□□□ 0.75
CCM2-203ENST00000461377 SPINT1O43278 529 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 SLCO2B1O94956 709 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 AP1S2P56377 157 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 RPL38P63173 70 aaKnown RBP19.76■□□□□ 0.75
CCM2-203ENST00000461377 MAD2L1Q13257 205 aaPredicted RBP19.76■□□□□ 0.75
CCM2-203ENST00000461377 ACOX1Q15067 660 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 GGTA1PQ4G0N0 100 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 ICA1LQ8NDH6 482 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 P2RY13Q9BPV8 354 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 ACTR8Q9H981 624 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 SFXN1Q9H9B4 322 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 ASIC5Q9NY37 505 aa19.76■□□□□ 0.75
CCM2-203ENST00000461377 EIF3LQ9Y262 564 aaKnown RBP19.76■□□□□ 0.75
CCM2-203ENST00000461377 PABPN1LA6NDY0 278 aaKnown RBP19.75■□□□□ 0.75
CCM2-203ENST00000461377 OTOL1A6NHN0 477 aaPredicted RBP19.75■□□□□ 0.75
CCM2-203ENST00000461377 A6NHS1 94 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 OR2AG2A6NM03 316 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 RSL1D1O76021 490 aaKnown RBP19.75■□□□□ 0.75
CCM2-203ENST00000461377 NRIP1P48552 1158 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 HMGCS1Q01581 520 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 HNRNPA1L2Q32P51 320 aaKnown RBP19.75■□□□□ 0.75
CCM2-203ENST00000461377 LCN8Q6JVE9 175 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 GALNT13Q8IUC8 556 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 RAVER1Q8IY67 606 aaKnown RBP19.75■□□□□ 0.75
CCM2-203ENST00000461377 RASGEF1AQ8N9B8 481 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 VN1R2Q8NFZ6 395 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 DNAJB14Q8TBM8 379 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 MCOLN3Q8TDD5 553 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 AP2M1Q96CW1 435 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 COQ10AQ96MF6 247 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 UHRF1Q96T88 793 aaPredicted RBP19.75■□□□□ 0.75
CCM2-203ENST00000461377 DEC1Q9P2X7 70 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 CHD7Q9P2D1 2997 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 PDE4DIPQ5VU43 2346 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 PRRC2BQ5JSZ5 2229 aaKnown RBP19.75■□□□□ 0.75
CCM2-203ENST00000461377 KCNE1BA0A087WTH5 132 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 AQP12BA6NM10 295 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 WNT9AO14904 365 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 KRT6AP02538 564 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 KRT6BP04259 564 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 GNPDA1P46926 289 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 KRT6CP48668 564 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 METAP1P53582 386 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 KIAA0040Q15053 153 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 PTCHD3Q3KNS1 767 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 FNDC3BQ53EP0 1204 aaKnown RBP19.75■□□□□ 0.75
CCM2-203ENST00000461377 HABP4Q5JVS0 413 aaKnown RBP19.75■□□□□ 0.75
CCM2-203ENST00000461377 C9orf50Q5SZB4 431 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 C9orf64Q5T6V5 341 aa19.75■□□□□ 0.75
CCM2-203ENST00000461377 NEK5Q6P3R8 708 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms