RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 TMEM9BQ9NQ34 198 aa7.42□□□□□ -1.22
ABCA4-202ENST00000460514 DNAAF2Q9NVR5 837 aaKnown RBP7.42□□□□□ -1.22
ABCA4-202ENST00000460514 NLGN3Q9NZ94 848 aa7.42□□□□□ -1.22
ABCA4-202ENST00000460514 TBC1D29Q9UFV1 150 aa7.42□□□□□ -1.22
ABCA4-202ENST00000460514 DCDC2Q9UHG0 476 aa7.42□□□□□ -1.22
ABCA4-202ENST00000460514 PNMA8BQ9ULN7 279 aaPredicted RBP7.42□□□□□ -1.22
ABCA4-202ENST00000460514 MED16Q9Y2X0 877 aa7.42□□□□□ -1.22
ABCA4-202ENST00000460514 PCYT1BQ9Y5K3 369 aaPredicted RBP7.42□□□□□ -1.22
ABCA4-202ENST00000460514 ACTL7BQ9Y614 415 aa7.42□□□□□ -1.22
ABCA4-202ENST00000460514 KNL1Q8NG31 2342 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 ZFC3H1O60293 1989 aaKnown RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 PCDH15Q96QU1 1955 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 TDRD6O60522 2096 aaKnown RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 PRR19A6NJB7 356 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 SYCE1LA8MT33 242 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 B4DGG1 531 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 BTN3A1O00481 513 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 COPEO14579 308 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 SLC16A5O15375 505 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 YY2O15391 372 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 FLRT2O43155 660 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 ZBTB14O43829 449 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 GLRA3O75311 464 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 RFPL1O75677 317 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 KLHL2O95198 593 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 VIPP01282 170 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 ENO2P09104 434 aaPredicted RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 RBP1P09455 135 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 HIST1H2AGP0C0S8 130 aaPredicted RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 CCNYL3P0C7X3 344 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 SLC35E2BP0CK96 405 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 KRT4P19013 534 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 HIST1H2ADP20671 130 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 RPL10P27635 214 aaKnown RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 GRK6P43250 576 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 DUSP3P51452 185 aaPredicted RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 TIAL1Q01085 375 aaKnown RBP eCLIP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 IL9RQ01113 521 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 FOXK2Q01167 660 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 NHLH1Q02575 133 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 BNIP3Q12983 259 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 CSHL1Q14406 222 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 ZNF460Q14592 562 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 ACAP2Q15057 778 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 TCEA2Q15560 299 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 SEPT7Q16181 437 aaKnown RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 PRAMEF14Q5SWL7 426 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 AGBL2Q5U5Z8 902 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 KCTD16Q68DU8 428 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 CAPRIN2Q6IMN6 1127 aaKnown RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 TCEAL6Q6IPX3 200 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 ZCCHC8Q6NZY4 707 aaKnown RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 NAPRTQ6XQN6 538 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 PRR23CQ6ZRP0 262 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 FAM83HQ6ZRV2 1179 aaPredicted RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 FRA10AC1Q70Z53 315 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 TRABD2AQ86V40 505 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 NRROSQ86YC3 692 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 DCUN1D3Q8IWE4 304 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 SRRM1Q8IYB3 904 aaKnown RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 TBC1D21Q8IYX1 336 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 ARL10Q8N8L6 244 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 ACVR1CQ8NER5 493 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 OR4C6Q8NH72 309 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 GIMAP7Q8NHV1 300 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 CCL4L1Q8NHW4 92 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 STAG3L4Q8TBR4 150 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 MCOLN3Q8TDD5 553 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 SAP25Q8TEE9 199 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 MZB1Q8WU39 189 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 EEF1AKMT1Q8WVE0 214 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 TFGQ92734 400 aaPredicted RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 TCEAL3Q969E4 200 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 SCYL1Q96KG9 808 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 HIST1H2AHQ96KK5 128 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 UBXN10Q96LJ8 280 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 C12orf66Q96MD2 445 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 HIST1H2AJQ99878 128 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 H2AFJQ9BTM1 129 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 OR52A5Q9H2C5 316 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 TRIT1Q9H3H1 467 aaKnown RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 SMOC1Q9H4F8 434 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 TMBIM4Q9HC24 238 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 FSCN3Q9NQT6 498 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 PRDM8Q9NQV8 689 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 POT1Q9NUX5 634 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 IMP3Q9NV31 184 aaKnown RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 PCMTD2Q9NV79 361 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 GALPQ9UBC7 116 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 GULP1Q9UBP9 304 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 POLG2Q9UHN1 485 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 MID2Q9UJV3 735 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 GRID1Q9ULK0 1009 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 PSMD13Q9UNM6 376 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 NOVA2Q9UNW9 492 aaKnown RBP7.41□□□□□ -1.22
ABCA4-202ENST00000460514 CDYLQ9Y232 598 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 ASF1AQ9Y294 204 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 PLEKHM1Q9Y4G2 1056 aa7.41□□□□□ -1.22
ABCA4-202ENST00000460514 A6NCN8 305 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms