RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 CHST8Q9H2A9 424 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 ACTR10Q9NZ32 417 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 TLK1Q9UKI8 766 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 FARSAQ9Y285 508 aaKnown RBP22.08■■□□□ 1.13
PTPN4-207ENST00000460162 SPENQ96T58 3664 aaKnown RBP22.08■■□□□ 1.12
PTPN4-207ENST00000460162 CCDC78A2IDD5 438 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 TMEM150CB9EJG8 249 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 MEN1O00255 615 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 SUN1O94901 812 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 RAB40ALP0C0E4 278 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 NR1D1P20393 614 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 CYP2A7P20853 494 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 SHMT2P34897 504 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 LMAN1P49257 510 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 PLOD1Q02809 727 aaPredicted RBP22.07■■□□□ 1.12
PTPN4-207ENST00000460162 CCDC38Q502W7 563 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 PLEKHS1Q5SXH7 462 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 AFTPHQ6ULP2 937 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 ADGRF3Q8IZF5 1079 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 OR13J1Q8NGT2 312 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 OR1L3Q8NH93 324 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 ELMO1Q92556 727 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 CLIP3Q96DZ5 547 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 TRAPPC9Q96Q05 1148 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 RANBP9Q96S59 729 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 TSGA10Q9BZW7 698 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 RIMKLBQ9ULI2 386 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 ICKQ9UPZ9 632 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 PRSS21Q9Y6M0 314 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 NBASA2RRP1 2371 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 SPTBP11277 2137 aa22.07■■□□□ 1.12
PTPN4-207ENST00000460162 CCDC162PA2VCL2 907 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 OR51F1A6NGY5 319 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 F8W8V4 182 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 OR56A5P0C7T3 313 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 PRKG2Q13237 762 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 SYTL3Q4VX76 610 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 LYPLAL1Q5VWZ2 237 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 SPESP1Q6UW49 350 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 PPP1R21Q6ZMI0 780 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 ASB18Q6ZVZ8 466 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 TBC1D21Q8IYX1 336 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 OR5AR1Q8NGP9 310 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 TTC1Q99614 292 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 XKR8Q9H6D3 395 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 ACTR5Q9H9F9 607 aaPredicted RBP22.06■■□□□ 1.12
PTPN4-207ENST00000460162 ETNK1Q9HBU6 452 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 PCMTD2Q9NV79 361 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 POLG2Q9UHN1 485 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 ASF1AQ9Y294 204 aa22.06■■□□□ 1.12
PTPN4-207ENST00000460162 E7EVH7 732 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 K7EM74 188 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 DNAJB5O75953 348 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 IFNB1P01574 187 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 ACADLP28330 430 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 ITGA1P56199 1179 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 ACVR1Q04771 509 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 PRAMEF17Q5VTA0 474 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 FAM198BQ6UWH4 519 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 HOOK3Q86VS8 718 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 SLC13A5Q86YT5 568 aaPredicted RBP22.05■■□□□ 1.12
PTPN4-207ENST00000460162 SYTL1Q8IYJ3 562 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 ENDOVQ8N8Q3 282 aaKnown RBP22.05■■□□□ 1.12
PTPN4-207ENST00000460162 TEX19Q8NA77 164 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 PEX13Q92968 403 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 NRTNQ99748 197 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 NLNQ9BYT8 704 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 TRIM55Q9BYV6 548 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 SERTAD3Q9UJW9 196 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 SNX7Q9UNH6 387 aa22.05■■□□□ 1.12
PTPN4-207ENST00000460162 SLC5A10A0PJK1 596 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 GOLGA6L6A8MZA4 724 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 E7EQ34 232 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 KDM1AO60341 852 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 GOT2P00505 430 aaKnown RBP22.04■■□□□ 1.12
PTPN4-207ENST00000460162 PVRP15151 417 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 TSTD2Q5T7W7 516 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 CPZQ66K79 652 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 CDHR3Q6ZTQ4 885 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 C19orf47Q8N9M1 422 aaKnown RBP22.04■■□□□ 1.12
PTPN4-207ENST00000460162 SPC24Q8NBT2 197 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 OR5K2Q8NHB8 316 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 ADAMTS17Q8TE56 1095 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 DPH2Q9BQC3 489 aaPredicted RBP22.04■■□□□ 1.12
PTPN4-207ENST00000460162 SLC7A5P2Q9GIP4 190 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 ZNF148Q9UQR1 794 aa22.04■■□□□ 1.12
PTPN4-207ENST00000460162 PCDHGA9Q9Y5G4 932 aaKnown RBP22.04■■□□□ 1.12
PTPN4-207ENST00000460162 LRRK2Q5S007 2527 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 KRT86O43790 486 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 HBQ1P09105 142 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 UGT2B7P16662 529 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 ADRA1DP25100 572 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 UNC5AQ6ZN44 842 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 NLRP9Q7RTR0 991 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 HDAC10Q969S8 669 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 SGSM3Q96HU1 749 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 CHRNA10Q9GZZ6 450 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 KLHL25Q9H0H3 589 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 CASS4Q9NQ75 786 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 ACSS2Q9NR19 701 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms