RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 ZNF648Q5T619 568 aaPredicted RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 METTL21CQ5VZV1 264 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 METRNLQ641Q3 311 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 GTF2H2CQ6P1K8 395 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZCCHC23Q6ZST2 131 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 RFLNAQ6ZTI6 216 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 CDHR3Q6ZTQ4 885 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 GPRIN3Q6ZVF9 776 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 LRRC70Q7Z2Q7 622 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 TAF8Q7Z7C8 310 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC9B2Q86UD5 537 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 PDZD3Q86UT5 571 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 TRIM74Q86UV6 250 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 IQCHQ86VS3 1027 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 OOSP2Q86WS3 158 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 DCUN1D3Q8IWE4 304 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 PARP9Q8IXQ6 854 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 TBC1D21Q8IYX1 336 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 KRT78Q8N1N4 520 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 OXR1Q8N573 874 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 TEX9Q8N6V9 391 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 MFSD2AQ8NA29 543 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 TP53I13Q8NBR0 393 aaPredicted RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 PLA2G15Q8NCC3 412 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 CEP70Q8NHQ1 597 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 AGR3Q8TD06 166 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 SETD7Q8WTS6 366 aaKnown RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 ANKRD49Q8WVL7 239 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 ASB11Q8WXH4 323 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 EZH1Q92800 747 aaPredicted RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 BIRC7Q96CA5 298 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 COX14Q96I36 57 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 SEC16BQ96JE7 1060 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 C12orf66Q96MD2 445 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 HAUS8Q9BT25 410 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 C1QTNF1Q9BXJ1 281 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 CD244Q9BZW8 370 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZMYND15Q9H091 742 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 C12orf65Q9H3J6 166 aaKnown RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 MVB12BQ9H7P6 319 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 IPPKQ9H8X2 491 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 COG4Q9H9E3 785 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 SEMA4BQ9NPR2 832 aaPredicted RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 PRDM6Q9NQX0 595 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 MBNL1Q9NR56 388 aaKnown RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 ABCF3Q9NUQ8 709 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 DNAJC11Q9NVH1 559 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 TRNAU1APQ9NX07 287 aaKnown RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 DNAJC28Q9NX36 388 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 SPASTQ9UBP0 616 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 SERGEFQ9UGK8 458 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 DCTN4Q9UJW0 460 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 HCN2Q9UL51 889 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZFR2Q9UPR6 939 aaKnown RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 CDYLQ9Y232 598 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 MTF2Q9Y483 593 aaPredicted RBP5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 PRSS21Q9Y6M0 314 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 COL4A3Q01955 1670 aa5.71□□□□□ -1.5
RNU1-88P-201ENST00000459274 FANCMQ8IYD8 2048 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 IGHV1OR15-9A0A0B4J2B8 117 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC5A10A0PJK1 596 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ERICH4A6NGS2 130 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 H0YHG0 523 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 GFYI3L273 518 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 K7EPI3 171 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 K7ESM1 405 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 AZIN1O14977 448 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 LATO43561 262 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 RGS14O43566 566 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 SNX3O60493 162 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ULK1O75385 1050 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PSIP1O75475 530 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 MATN4O95460 622 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 CLDN9O95484 217 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 STAMBPO95630 424 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 VIPP01282 170 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ANXA6P08133 673 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 EBLN1P0CF75 366 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 UROSP10746 265 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 FGF3P11487 239 aaPredicted RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 DDX5P17844 614 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 AOC1P19801 751 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 DRD4P21917 467 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 HRH2P25021 359 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 RPL10P27635 214 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 MAPK1P28482 360 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 HOXA6P31267 233 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 IGFALSP35858 605 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ACTR1BP42025 376 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 HSPA7P48741 367 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 AFF3P51826 1226 aaKnown RBP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PNLIPRP1P54315 467 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 AQP5P55064 265 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 CLDN2P57739 230 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 ACTR1AP61163 376 aa5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 HNRNPKP61978 463 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU1-88P-201ENST00000459274 PPP2CBP62714 309 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms