RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PTPN3P26045 913 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 OAS2P29728 719 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CCR10P46092 362 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CSRP3P50461 194 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CTSCP53634 463 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 POLE2P56282 527 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 UBE2IP63279 158 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 IFI35P80217 286 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TLE1Q04724 770 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 WASHC5Q12768 1159 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TMEM115Q12893 351 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 KCNAB2Q13303 367 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 OLIG2Q13516 323 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 ERV3-1Q14264 604 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 KCNAB1Q14722 419 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 KIR2DS5Q14953 304 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 PDK1Q15118 436 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CHRNA6Q15825 494 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 ATP13A5Q4VNC0 1218 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF569Q5MCW4 686 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CCDC70Q6NSX1 233 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TMEM220Q6QAJ8 160 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 MFSD7Q6UXD7 560 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CEACAM20Q6UY09 585 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CERS6Q6ZMG9 384 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 ATG14Q6ZNE5 492 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 FAM92BQ6ZTR7 304 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TMEM26Q6ZUK4 368 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 PID1Q7Z2X4 250 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TMEM135Q86UB9 458 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 LRRTM4Q86VH4 590 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 ZC3H18Q86VM9 953 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 PLXDC1Q8IUK5 500 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 PHYKPLQ8IUZ5 450 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TRIM48Q8IWZ4 208 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TTC30BQ8N4P2 665 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TRAM1L1Q8N609 369 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CCDC112Q8NEF3 446 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 GDAP1Q8TB36 358 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 PIWIL2Q8TC59 973 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 RSC1A1Q92681 617 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TADA1Q96BN2 335 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 HAUS1Q96CS2 278 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 RCC1LQ96I51 464 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC45A3Q96JT2 553 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 C9orf72Q96LT7 481 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TEKT5Q96M29 485 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF830Q96NB3 372 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 OLFM3Q96PB7 478 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 OR6C1Q96RD1 312 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 DPYSL5Q9BPU6 564 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 HERPUD2Q9BSE4 406 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC25A51Q9H1U9 297 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 STN1Q9H668 368 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 RMI1Q9H9A7 625 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 GLOD4Q9HC38 313 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 IL26Q9NPH9 171 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 FBXO8Q9NRD0 319 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 SEMA3GQ9NS98 782 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 GPATCH2Q9NW75 528 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 DUSP13Q9UII6 198 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 DNPEPQ9ULA0 475 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 KCTD3Q9Y597 815 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CFAP20Q9Y6A4 193 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 FER1L5A0AVI2 2057 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 DOCK10Q96BY6 2186 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 ICE1Q9Y2F5 2266 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 GCN1Q92616 2671 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 A0A0A6YYK5 440 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 LOC285095A0A1B0GVY8 99 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 SSU72P8A0A1W2PR75 194 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 RGSL1A5PLK6 1076 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 OR2AG2A6NM03 316 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 OR5K4A6NMS3 321 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF891A8MT65 544 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 KMOO15229 486 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 SPOPO43791 374 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 DLX3O60479 287 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 FLNBO75369 2602 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 POP7O75817 140 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 MTA2O94776 668 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 KIAA0754O94854 1291 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 NDST3O95803 873 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 AGTP01019 485 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 C9P02748 559 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 NTRK1P04629 796 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 GSNP06396 782 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 GSTM1P09488 218 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 SFTPCP11686 197 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 FOLR1P15328 257 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 FOSL1P15407 271 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 TCN2P20062 427 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 IDSP22304 550 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 PBLDP30039 288 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 MAN1A1P33908 653 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 DLSTP36957 453 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ARHGAP25P42331 645 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 CDKN2BP42772 138 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ARCN1P48444 511 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms