RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 FKBP10Q96AY3 582 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 GBP5Q96PP8 586 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 COPS8Q99627 209 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 OR52A5Q9H2C5 316 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 WDR54Q9H977 334 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 TXLNGQ9NUQ3 528 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 KLHL8Q9P2G9 620 aaPredicted RBP13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 IFT80Q9P2H3 777 aaPredicted RBP13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 HACD1B0YJ81 288 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 H3BMH7 237 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 BTN3A3O00478 584 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 SGTAO43765 313 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 KDM1AO60341 852 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 ANXA9O76027 345 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 POLBP06746 335 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 ATP1B2P14415 290 aaPredicted RBP13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 ITGALP20701 1170 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 SHMT2P34897 504 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 CHRNA4P43681 627 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 GLRBP48167 497 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 BOP1Q14137 746 aaKnown RBP13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 NOMO1Q15155 1222 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 LLGL1Q15334 1064 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 TAZQ16635 292 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 GPR33Q49SQ1 333 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 MLIPQ5VWP3 458 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 NPNTQ6UXI9 565 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 KCNMB4Q86W47 210 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 ADGRF3Q8IZF5 1079 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 NXPE1Q8N323 547 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 SLC25A41Q8N5S1 370 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 IPMKQ8NFU5 416 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 OR52E1Q8NGJ3 308 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 P3H4Q92791 437 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 DLG3Q92796 817 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 OXNAD1Q96HP4 312 aaPredicted RBP13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 RBM41Q96IZ5 413 aaKnown RBP13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 PPP1R2P1Q96PQ5 205 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 FERD3LQ96RJ6 166 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 FERMT1Q9BQL6 677 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 COG4Q9H9E3 785 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 MRM3Q9HC36 420 aaKnown RBP13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 ACTR10Q9NZ32 417 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 OR6C2Q9NZP2 312 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 CRLS1Q9UJA2 301 aa13.81□□□□□ -0.2
LYSMD3-202ENST00000453259 OTOGQ6ZRI0 2925 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 PCSK5Q92824 1860 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 PIKFYVEQ9Y2I7 2098 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 IGLV3-16A0A075B6K0 115 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 CCDC66A2RUB6 948 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 F5H423 210 aaPredicted RBP13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 LRRTM2O43300 516 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 CRTAMO95727 393 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 ALBP02768 609 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 PIM1P11309 404 aaPredicted RBP13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 MMP11P24347 488 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 GEMP55040 296 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 DYNLT1P63172 113 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 TLR1Q15399 786 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 NKAIN1Q4KMZ8 207 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 AGAP7PQ5VUJ5 663 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 PRAMEF13Q5VWM6 474 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 PID1Q7Z2X4 250 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 PPP1R32Q7Z5V6 425 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 SNX20Q7Z614 316 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 SRRM1Q8IYB3 904 aaKnown RBP13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 ZNF567Q8N184 647 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 OR4K2Q8NGD2 314 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 SLC35G2Q8TBE7 412 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 FAR1Q8WVX9 515 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 AGAP4Q96P64 663 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 NDC1Q9BTX1 674 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 EPS8L2Q9H6S3 715 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 POLG2Q9UHN1 485 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 FEZ2Q9UHY8 353 aaPredicted RBP13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 NXT1Q9UKK6 140 aaKnown RBP13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 NOVA2Q9UNW9 492 aaKnown RBP13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 NTNG1Q9Y2I2 539 aa13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 KLF2Q9Y5W3 355 aaPredicted RBP13.8□□□□□ -0.2
LYSMD3-202ENST00000453259 SPTBP11277 2137 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 QSOX1O00391 747 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 E2F3O00716 465 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 ONECUT2O95948 504 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 GYPCP04921 128 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 STSP08842 583 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 CBSLP0DN79 551 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 CA5AP35218 305 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 CBSP35520 551 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 CDKN2BP42772 138 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 GABRA4P48169 554 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 ARSFP54793 590 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 XIAPP98170 497 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 PLOD1Q02809 727 aaPredicted RBP13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 SLC5A12Q1EHB4 618 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 ZNF658BQ4V348 819 aaPredicted RBP13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 YOD1Q5VVQ6 348 aaPredicted RBP13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 ITPRIPL1Q6GPH6 555 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 RPUSD3Q6P087 351 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms