RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 GMCL1P1Q8NEA9 526 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 MCPH1Q8NEM0 835 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 SETD6Q8TBK2 473 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 WIPF2Q8TF74 440 aaPredicted RBP4.31□□□□□ -1.72
LINC00393-202ENST00000452852 KCNE4Q8WWG9 221 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 LPGAT1Q92604 370 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 ZBTB9Q96C00 473 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 RRNAD1Q96FB5 475 aaKnown RBP4.31□□□□□ -1.72
LINC00393-202ENST00000452852 CEP295NLQ96MC4 621 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 GLT1D1Q96MS3 346 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 PIMREGQ9BSJ6 248 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 C1QTNF1Q9BXJ1 281 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 COPS7BQ9H9Q2 264 aaPredicted RBP4.31□□□□□ -1.72
LINC00393-202ENST00000452852 SLC38A10Q9HBR0 1119 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 RAVER2Q9HCJ3 691 aaKnown RBP4.31□□□□□ -1.72
LINC00393-202ENST00000452852 STX8Q9UNK0 236 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 LAMP3Q9UQV4 416 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 RIPK3Q9Y572 518 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 CLIC4Q9Y696 253 aa4.31□□□□□ -1.72
LINC00393-202ENST00000452852 ZMYM2Q9UBW7 1377 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ELP1O95163 1332 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 REV3LO60673 3130 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 A0A0U1RQK1 487 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ZNF320A2RRD8 509 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ASB14A6NK59 587 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 FOXO6A8MYZ6 492 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 AKR1B15C9JRZ8 316 aaPredicted RBP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 SOCS2O14508 198 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 HSPB6O14558 160 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ATP2A1O14983 1001 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 RANBP6O60518 1105 aaKnown RBP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ZC3H11AO75152 810 aaKnown RBP eCLIP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 CNOT3O75175 753 aaKnown RBP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 JRKO75564 520 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 SNAI1O95863 264 aaPredicted RBP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ASGR1P07306 291 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 FOSL2P15408 326 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ERCC2P18074 760 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 DNASE1P24855 282 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 PRKCIP41743 596 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 SLC1A4P43007 532 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 GPR12P47775 334 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ACLYP53396 1101 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 CDH13P55290 713 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 TAS2R40P59535 323 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 GRSF1Q12849 480 aaKnown RBP eCLIP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 PPIGQ13427 754 aaKnown RBP eCLIP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 LAMB3Q13751 1172 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 SLMAPQ14BN4 828 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 SNAPC1Q16533 368 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 HYAL4Q2M3T9 481 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ZNF674Q2M3X9 581 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ALG10Q5BKT4 473 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ALG10BQ5I7T1 473 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 C9orf50Q5SZB4 431 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ARMCX2Q7L311 632 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ANKRD33Q7Z3H0 272 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 PIP4P1Q86T03 277 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 IQCHQ86VS3 1027 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ANKRD13BQ86YJ7 626 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 EPHX4Q8IUS5 362 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 TMEM199Q8N511 208 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 HORMAD2Q8N7B1 307 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 RBM15BQ8NDT2 890 aaKnown RBP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 HMCESQ96FZ2 354 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 SLC41A2Q96JW4 573 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 EGLN2Q96KS0 407 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 CFAP57Q96MR6 1250 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ZNF830Q96NB3 372 aaPredicted RBP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 ZNF570Q96NI8 536 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 SLITRK1Q96PX8 696 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 NUP85Q9BW27 656 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 GPR88Q9GZN0 384 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 CDT1Q9H211 546 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 MTIF3Q9H2K0 278 aaKnown RBP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 MMADHCQ9H3L0 296 aaPredicted RBP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 PIGMQ9H3S5 423 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 DENND2DQ9H6A0 471 aaPredicted RBP4.3□□□□□ -1.72
LINC00393-202ENST00000452852 RNF146Q9NTX7 359 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 OLAHQ9NV23 265 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 HEY2Q9UBP5 337 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 LCTP09848 1927 aa4.3□□□□□ -1.72
LINC00393-202ENST00000452852 CACNA1IQ9P0X4 2223 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 MYH7BA7E2Y1 1941 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 KIAA1217Q5T5P2 1943 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 MUC3AQ02505 3323 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 TANC1Q9C0D5 1861 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 IGKV6D-41A0A0C4DH26 115 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 LY6G6EA0A0G2JKS1 128 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 VCYO14598 125 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 PSMA7O14818 248 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 KIF1CO43896 1103 aaKnown RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 FMO6PO60774 539 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 CABYRO75952 493 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 RSL1D1O76021 490 aaKnown RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 RECQL5O94762 991 aaPredicted RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 MTA2O94776 668 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms