RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TPBGLP0DKB5 382 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 IMPDH2P12268 514 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 SRCP12931 536 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 DPP4P27487 766 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCNJ1P48048 391 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 STXBP1P61764 594 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 NFKB2Q00653 900 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 DNAJC3Q13217 504 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 CDKAL1Q5VV42 579 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 GTF2IRD2BQ6EKJ0 949 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 GTF2IRD2Q86UP8 949 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 FJX1Q86VR8 437 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCNMB4Q86W47 210 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 KDM1BQ8NB78 822 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF707Q96C28 371 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCTD15Q96SI1 283 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 PRSS16Q9NQE7 514 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 PRDM8Q9NQV8 689 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAF1Q9UNN5 650 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF232Q9UNY5 417 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMEM184BQ9Y519 407 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 GRID2IPA4D2P6 1211 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 POU2F2P09086 479 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR4D2P58180 307 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 KRT72Q14CN4 511 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZXDCQ2QGD7 858 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 BEND5Q7L4P6 421 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 ETFBKMTQ8IXQ9 262 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 HM13Q8TCT9 377 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCDC126Q96EE4 140 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 SDCBP2Q9H190 292 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 SH3BP4Q9P0V3 963 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 NFKBIL1Q9UBC1 381 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 PCDHA3Q9Y5H8 950 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 TNPO3Q9Y5L0 923 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 MCIDASD6RGH6 385 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 TOR1BO14657 336 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 TP53I11O14683 189 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 BRINP1O60477 761 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 OAS1P00973 400 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR12D1P0DN82 309 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 BUD31P41223 144 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC16A1P53985 500 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 ARSFP54793 590 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 SPDYCQ5MJ68 293 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 BBS12Q6ZW61 710 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 ACAD11Q709F0 780 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 RNF44Q7L0R7 432 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 STRA8Q7Z7C7 330 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRRC6Q86X45 466 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 KATNAL2Q8IYT4 538 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 NAV1Q8NEY1 1877 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZFP28Q8NHY6 868 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 TTC17Q96AE7 1141 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 SDCCAG3Q96C92 435 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 UBL7Q96S82 380 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 ADI1Q9BV57 179 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 NMRAL1Q9HBL8 299 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 ADGRG1Q9Y653 693 aa5.53□□□□□ -1.52
CDC42BPA-209ENST00000448940 PRAMEF11O60813 436 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF28P17035 718 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 P2RY2P41231 377 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 FNTAP49354 379 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 LIPNQ5VXI9 398 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 UBE2R2Q712K3 238 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SERPINA9Q86WD7 417 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 PEX5LQ8IYB4 626 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 OR52K1Q8NGK4 314 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 IP6K3Q96PC2 410 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 TEFMQ96QE5 360 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 HAUS8Q9BT25 410 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 MED18Q9BUE0 208 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 FAM96AQ9H5X1 160 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 FSCN3Q9NQT6 498 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SERINC1Q9NRX5 453 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 FAM237AA0A1B0GTK4 181 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SIGLEC6O43699 453 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 MSR1P21757 451 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 HCAR3P49019 387 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 CCR5P51681 352 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 DRG2P55039 364 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC10A7Q0GE19 358 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZBTB6Q15916 424 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SMYD5Q6GMV2 418 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 PLEKHA7Q6IQ23 1121 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 C1orf94Q6P1W5 598 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ABHD13Q7L211 337 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 PYROXD2Q8N2H3 581 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SPDL1Q96EA4 605 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC22A12Q96S37 553 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 PRMT1Q99873 361 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 FZD10Q9ULW2 581 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 OR1A2Q9Y585 309 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 FER1L6Q2WGJ9 1857 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 TCHHQ07283 1943 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 A0A0D9SEW6 157 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 MFSD11O43934 449 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 BEST1O76090 585 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 F10P00742 488 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 HLA-DQA2P01906 255 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms