RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 GSTM4Q03013 218 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 CEACAM7Q14002 265 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 CCNIQ14094 377 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 ZNF423Q2M1K9 1284 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 MMEL1Q495T6 779 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 FAM46CQ5VWP2 391 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 RAET1GQ6H3X3 334 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 EP400NLQ6ZTU2 488 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 NUDT18Q6ZVK8 323 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 LRRC70Q7Z2Q7 622 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 TRIM74Q86UV6 250 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 SFRP1Q8N474 314 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 MCOLN3Q8TDD5 553 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 TRPS1Q9UHF7 1281 aa17.31■□□□□ 0.36
LMNA-208ENST00000448611 BBIP1A8MTZ0 92 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 LOC730098B7Z3J9 87 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 MRASO14807 208 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 LILRB5O75023 590 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 PSIP1O75475 530 aaKnown RBP17.3■□□□□ 0.36
LMNA-208ENST00000448611 ERFP50548 548 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 THOP1P52888 689 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 BCL7AQ4VC05 210 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 SYTL3Q4VX76 610 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 HACD2Q6Y1H2 254 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 ADGRG6Q86SQ4 1221 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 LILRA3Q8N6C8 439 aaPredicted RBP17.3■□□□□ 0.36
LMNA-208ENST00000448611 CXorf40AQ8TE69 158 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 TMEM159Q96B96 161 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 HBEGFQ99075 208 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 CDX2Q99626 313 aaPredicted RBP17.3■□□□□ 0.36
LMNA-208ENST00000448611 RSPH9Q9H1X1 276 aaPredicted RBP17.3■□□□□ 0.36
LMNA-208ENST00000448611 SLC52A3Q9NQ40 469 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 FAM8A1Q9UBU6 413 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 RNF11Q9Y3C5 154 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 CCL27Q9Y4X3 112 aa17.3■□□□□ 0.36
LMNA-208ENST00000448611 LSM1O15116 133 aaKnown RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 WASP42768 502 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 MTHFRP42898 656 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 PREPP48147 710 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 GALK1P51570 392 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 PSME3P61289 254 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 SLC34A1Q06495 639 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 CAMK2GQ13555 558 aaPredicted RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 RPS6KA2Q15349 733 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 CCDC6Q16204 474 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 PTCHD3Q3KNS1 767 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 ATP6AP1LQ52LC2 224 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 C8orf82Q6P1X6 216 aaPredicted RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 RETREG3Q86VR2 466 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 CHPFQ8IZ52 775 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 AADATQ8N5Z0 425 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 ZNF513Q8N8E2 541 aaPredicted RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 ZCCHC2Q9C0B9 1178 aaKnown RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 GULP1Q9UBP9 304 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 KRT87PA6NCN2 255 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 PABPN1LA6NDY0 278 aaKnown RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 ARHGEF33A8MVX0 844 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 NR5A2O00482 541 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 SYNCRIPO60506 623 aaKnown RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 WDR47O94967 919 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 CAPN3P20807 821 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 GCKP35557 465 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 LTBRP36941 435 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 KIR2DL1P43626 348 aaPredicted RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 ZFP36L2P47974 494 aaKnown RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 PTDSS1P48651 473 aaKnown RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 ABRQ12979 859 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 PDCD4Q53EL6 469 aaKnown RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 C2orf27AQ580R0 203 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 BLOC1S3Q6QNY0 202 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.29■□□□□ 0.36
LMNA-208ENST00000448611 SLC22A15Q8IZD6 547 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 FNDC5Q8NAU1 212 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 KCNV2Q8TDN2 545 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 JADE3Q92613 823 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 EZH1Q92800 747 aaPredicted RBP17.29■□□□□ 0.36
LMNA-208ENST00000448611 FBXL8Q96CD0 374 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 C1orf50Q9BV19 199 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 OR2AG1Q9H205 316 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 HEBP1Q9NRV9 189 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 CLDND1Q9NY35 253 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 STOML1Q9UBI4 398 aa17.29■□□□□ 0.36
LMNA-208ENST00000448611 K7EQS6 105 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 FFAR3O14843 346 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 MID1O15344 667 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 GPR42O15529 346 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 FKBP6O75344 327 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 TNFRSF4P43489 277 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 TAS2R38P59533 333 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 EMX2Q04743 252 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 CST6Q15828 149 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 AGBL4Q5VU57 503 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 NEK5Q6P3R8 708 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 AAGABQ6PD74 315 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 MTSS1LQ765P7 747 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 TSPEARQ8WU66 669 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 ROPN1LQ96C74 230 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 MSLNLQ96KJ4 702 aa17.28■□□□□ 0.36
LMNA-208ENST00000448611 TEX37Q96LM6 180 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms