RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 LSMEM2Q8N112 164 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 FBXO39Q8N4B4 442 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 GPATCH11Q8N954 259 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 OR4E2Q8NGC2 313 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 OR5AR1Q8NGP9 310 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 OR5K2Q8NHB8 316 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 RSC1A1Q92681 617 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 ZDHHC12Q96GR4 267 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 TGM7Q96PF1 710 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 AARSD1Q9BTE6 412 aaKnown RBP13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 L2HGDHQ9H9P8 463 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 POLR1BQ9H9Y6 1135 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 ZDHHC18Q9NUE0 388 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 HRASLS2Q9NWW9 162 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 TAS2R13Q9NYV9 303 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 TMEM9Q9P0T7 183 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 TXNDC16Q9P2K2 825 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 KLHL42Q9P2K6 505 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 KLHL3Q9UH77 587 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 CORO1CQ9ULV4 474 aaPredicted RBP13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 SATB2Q9UPW6 733 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 CDYLQ9Y232 598 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 LOXL2Q9Y4K0 774 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 PIKFYVEQ9Y2I7 2098 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 OR6C74A6NCV1 312 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 TMEM8BA6NDV4 472 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 A8MU76 341 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 HGSO14964 777 aaPredicted RBP13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 SPAG6O75602 509 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 RASSF9O75901 435 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 RHOXF2BP0C7M4 288 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 JMJD7P0C870 316 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 RBMS1P29558 406 aaKnown RBP13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 ATP5DP30049 168 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 STX2P32856 288 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 CSTF2P33240 577 aaKnown RBP eCLIP13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 LSSP48449 732 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 CLCN7P51798 805 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 CFHR1Q03591 330 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 CYP4F3Q08477 520 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 ILF2Q12905 390 aaKnown RBP13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 CUL1Q13616 776 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 RTP5Q14D33 572 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 UNC5DQ6UXZ4 953 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 STRA8Q7Z7C7 330 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 SLC26A11Q86WA9 606 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 SIDT2Q8NBJ9 832 aaKnown RBP13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 RCBTB1Q8NDN9 531 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 OR52E1Q8NGJ3 308 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 MAGEC3Q8TD91 643 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 INPP5DQ92835 1189 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 FMO2Q99518 471 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 NDNQ99608 321 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 GPR21Q99679 349 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 RHOXF2Q9BQY4 288 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 TFB2MQ9H5Q4 396 aaKnown RBP13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 CCDC86Q9H6F5 360 aaKnown RBP13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 LATS2Q9NRM7 1088 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 OGFRQ9NZT2 677 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 SLC17A6Q9P2U8 582 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 TRMT6Q9UJA5 497 aaKnown RBP13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 TSR3Q9UJK0 312 aaKnown RBP13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 DHRS7Q9Y394 339 aa13.64□□□□□ -0.23
GTF3C3-206ENST00000448539 FREM2Q5SZK8 3169 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 KNTC1P50748 2209 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 UNC13CQ8NB66 2214 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 OR5K3A6NET4 321 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 MATN2O00339 956 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 PLD2O14939 933 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 GABRB3P28472 473 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 SHMT2P34897 504 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 SKIV2L2P42285 1042 aaKnown RBP13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 ABCG1P45844 678 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 GFERP55789 205 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 ACSBG2Q5FVE4 666 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 FAM45BPQ6NSW5 357 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 CYS1Q717R9 158 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 AMIGO1Q86WK6 493 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 DCUN1D3Q8IWE4 304 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 RAB42Q8N4Z0 105 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 AGBL5Q8NDL9 886 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 FAM45AQ8TCE6 357 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 ZCCHC14Q8WYQ9 949 aaKnown RBP13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 RAB33BQ9H082 229 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 PDP2Q9P2J9 529 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 GALPQ9UBC7 116 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 EPHA6Q9UF33 1036 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 RALYQ9UKM9 306 aaKnown RBP13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 PCDHGA8Q9Y5G5 932 aa13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 MN1Q10571 1320 aaPredicted RBP13.63□□□□□ -0.23
GTF3C3-206ENST00000448539 TCRBV9S1A1TA0A576 114 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 GSAPA4D1B5 854 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 TOX3O15405 576 aaPredicted RBP13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 C9P02748 559 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 CBSLP0DN79 551 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 ENO3P13929 434 aaPredicted RBP13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 POLR2CP19387 275 aaPredicted RBP13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 PHBP35232 272 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 CBSP35520 551 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 CCNFP41002 786 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms