RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 SYTL2Q9HCH5 934 aa7.37□□□□□ -1.23
AC004540.1-206ENST00000448056 SIRPGQ9P1W8 387 aa7.37□□□□□ -1.23
AC004540.1-206ENST00000448056 ZNF624Q9P2J8 865 aaPredicted RBP7.37□□□□□ -1.23
AC004540.1-206ENST00000448056 PSMC3IPQ9P2W1 217 aaPredicted RBP7.37□□□□□ -1.23
AC004540.1-206ENST00000448056 TBK1Q9UHD2 729 aa7.37□□□□□ -1.23
AC004540.1-206ENST00000448056 BTBD3Q9Y2F9 522 aa7.37□□□□□ -1.23
AC004540.1-206ENST00000448056 ZNF292O60281 2723 aa7.37□□□□□ -1.23
AC004540.1-206ENST00000448056 CABIN1Q9Y6J0 2220 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 LY6G6EA0A0G2JKS1 128 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 SMIM23A6NLE4 172 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 EIF3FO00303 357 aaPredicted RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 IFRD1O00458 451 aaPredicted RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 PPM1DO15297 605 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 PHGDHO43175 533 aaKnown RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CBFA2T3O75081 653 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CDH16O75309 829 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 RFPL1O75677 317 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 LDOC1O95751 146 aaPredicted RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 TSPAN12O95859 305 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 AVPP01185 164 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ALDOAP04075 364 aaKnown RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 C2P06681 752 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 SLC35E2BP0CK96 405 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CCDC166P0CW27 439 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 MPC1LP0DKB6 136 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 MTHFD1P11586 935 aaKnown RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 MYF5P13349 255 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ENO3P13929 434 aaPredicted RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 SLC26A3P40879 764 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 MAGEA12P43365 314 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 RGS4P49798 205 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 MAZP56270 477 aaKnown RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ZNF844Q08AG5 666 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ZNF460Q14592 562 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CASP8Q14790 479 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 NR0B2Q15466 257 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 INAVAQ3KP66 663 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 C14orf28Q4W4Y0 310 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 PPM1JQ5JR12 505 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 LRIG3Q6UXM1 1119 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 RAPH1Q70E73 1250 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 HDXQ7Z353 690 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CCDC91Q7Z6B0 441 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CMC1Q7Z7K0 106 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 PIP4P1Q86T03 277 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 SLC9B2Q86UD5 537 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 PDZD3Q86UT5 571 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 NAXDQ8IW45 347 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 SLC35F3Q8IY50 421 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CPNE9Q8IYJ1 553 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 NKAPQ8N5F7 415 aaKnown RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ARL10Q8N8L6 244 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 KYQ8NBH2 561 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 PHC3Q8NDX5 983 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CFAP61Q8NHU2 1237 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 MAPK15Q8TD08 544 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 SLC37A2Q8TED4 501 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 MZB1Q8WU39 189 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 SKA2Q8WVK7 121 aaPredicted RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ANKRD49Q8WVL7 239 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ZFPM2Q8WW38 1151 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ASB11Q8WXH4 323 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 HPS1Q92902 700 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ISL2Q96A47 359 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 LINGO1Q96FE5 620 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 UBXN10Q96LJ8 280 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 APOLD1Q96LR9 279 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 RMDN2Q96LZ7 410 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 C12orf66Q96MD2 445 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CAMK1GQ96NX5 476 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ZIM3Q96PE6 472 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 FERD3LQ96RJ6 166 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 GPAMQ9HCL2 828 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 SLC40A1Q9NP59 571 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 SNX15Q9NRS6 342 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 EURLQ9NYK6 297 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 NCKIPSDQ9NZQ3 722 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CPNE7Q9UBL6 633 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CTNNAL1Q9UBT7 734 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 TLK1Q9UKI8 766 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 PADI4Q9UM07 663 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ACOT9Q9Y305 439 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 HEBP2Q9Y5Z4 205 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 CFAP20Q9Y6A4 193 aaKnown RBP7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 COLEC10Q9Y6Z7 277 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 U3KQA8 63 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 ADAMTS9Q9P2N4 1935 aa7.36□□□□□ -1.23
AC004540.1-206ENST00000448056 RALGAPA1Q6GYQ0 2036 aa7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 LRP4O75096 1905 aa7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 A0A087X1B8 175 aa7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 A0A096LPK6 155 aa7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 PRAMEF33A0A0G2JMD5 474 aa7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 A0A1W2PPM1 405 aa7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 FOXO6A8MYZ6 492 aa7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 GFYI3L273 518 aa7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 TM4SF5O14894 197 aa7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 NUDT21O43809 227 aaKnown RBP7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 PSIP1O75475 530 aaKnown RBP7.35□□□□□ -1.23
AC004540.1-206ENST00000448056 C1orf105O95561 183 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms