RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 KIR2DS3K7RE56 304 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 SNX2O60749 519 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 AVILO75366 819 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 DNAJB5O75953 348 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 DLGAP3O95886 979 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 GOT2P00505 430 aaKnown RBP12.15□□□□□ -0.46
SSR4-205ENST00000447375 SLC2A4P14672 509 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 XRCC1P18887 633 aaPredicted RBP12.15□□□□□ -0.46
SSR4-205ENST00000447375 IDSP22304 550 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 IVDP26440 423 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 CSF2RBP32927 897 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 DLSTP36957 453 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 LEPRP48357 1165 aaKnown RBP12.15□□□□□ -0.46
SSR4-205ENST00000447375 TERF1P54274 439 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 KIR2DS5Q14953 304 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 DBN1Q16643 649 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 PLA2G4EQ3MJ16 856 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 PRR30Q53SZ7 412 aaPredicted RBP12.15□□□□□ -0.46
SSR4-205ENST00000447375 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.15□□□□□ -0.46
SSR4-205ENST00000447375 LYPLAL1Q5VWZ2 237 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 METRNLQ641Q3 311 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 AFTPHQ6ULP2 937 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 CERS6Q6ZMG9 384 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 DET1Q7L5Y6 550 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 TMEM135Q86UB9 458 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 KLHL7Q8IXQ5 586 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 PPIL6Q8IXY8 311 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 BEND7Q8N7W2 519 aaPredicted RBP12.15□□□□□ -0.46
SSR4-205ENST00000447375 OR6P1Q8NGX9 317 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 OR2L2Q8NH16 312 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 OR4L1Q8NH43 312 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 SERPINB12Q96P63 405 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 ZMYND15Q9H091 742 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 OSGEPL1Q9H4B0 414 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 SARS2Q9NP81 518 aaKnown RBP12.15□□□□□ -0.46
SSR4-205ENST00000447375 SYBUQ9NX95 663 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 DNAJC16Q9Y2G8 782 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 ITPR3Q14573 2671 aa12.15□□□□□ -0.46
SSR4-205ENST00000447375 ADGRG4Q8IZF6 3080 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 GOLGA8MH3BSY2 632 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 DNALI1O14645 258 aaPredicted RBP12.14□□□□□ -0.47
SSR4-205ENST00000447375 KATNA1O75449 491 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 AP2A2O94973 939 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 BRAFP15056 766 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 NMBRP28336 390 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 NSG1P42857 185 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 PPM1FP49593 454 aaPredicted RBP12.14□□□□□ -0.47
SSR4-205ENST00000447375 PRLHRP49683 370 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 PGDP52209 483 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 PRAMEP78395 509 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 DR1Q01658 176 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 MAP7Q14244 749 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 ITIH4Q14624 930 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 SNAP47Q5SQN1 464 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 RNASEH2BQ5TBB1 312 aaKnown RBP12.14□□□□□ -0.47
SSR4-205ENST00000447375 FAM83HQ6ZRV2 1179 aaPredicted RBP12.14□□□□□ -0.47
SSR4-205ENST00000447375 PCGF5Q86SE9 256 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 SLC9B2Q86UD5 537 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 APLFQ8IW19 511 aaPredicted RBP12.14□□□□□ -0.47
SSR4-205ENST00000447375 CLDN19Q8N6F1 224 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 AVL9Q8NBF6 648 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.14□□□□□ -0.47
SSR4-205ENST00000447375 SPATA4Q8NEY3 305 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 NAT14Q8WUY8 206 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 TTC1Q99614 292 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 TRIM55Q9BYV6 548 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 APMAPQ9HDC9 416 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 SCHIP1Q9P0W5 487 aaPredicted RBP12.14□□□□□ -0.47
SSR4-205ENST00000447375 ZNF624Q9P2J8 865 aaPredicted RBP12.14□□□□□ -0.47
SSR4-205ENST00000447375 PDP2Q9P2J9 529 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 CPNE7Q9UBL6 633 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 ASIC3Q9UHC3 531 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 ACSL5Q9ULC5 683 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 SOX13Q9UN79 622 aa12.14□□□□□ -0.47
SSR4-205ENST00000447375 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
SSR4-205ENST00000447375 C17orf113A0A1B0GUU1 675 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 FAM237BA0A1B0GVD1 139 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 PDZK1P1A8MUH7 402 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 POLR1CO15160 346 aaPredicted RBP12.13□□□□□ -0.47
SSR4-205ENST00000447375 CD3EAPO15446 510 aaKnown RBP12.13□□□□□ -0.47
SSR4-205ENST00000447375 GSTM1P09488 218 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 VARSP26640 1264 aaKnown RBP12.13□□□□□ -0.47
SSR4-205ENST00000447375 ARNTP27540 789 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 RPL10P27635 214 aaKnown RBP12.13□□□□□ -0.47
SSR4-205ENST00000447375 SLC19A1P41440 591 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 DRG2P55039 364 aaKnown RBP12.13□□□□□ -0.47
SSR4-205ENST00000447375 UBE2IP63279 158 aaKnown RBP12.13□□□□□ -0.47
SSR4-205ENST00000447375 GSTM4Q03013 218 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 HHEXQ03014 270 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 DHX34Q14147 1143 aaKnown RBP12.13□□□□□ -0.47
SSR4-205ENST00000447375 NFE2L1Q14494 772 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 ZNF658BQ4V348 819 aaPredicted RBP12.13□□□□□ -0.47
SSR4-205ENST00000447375 FASTKD1Q53R41 847 aaKnown RBP12.13□□□□□ -0.47
SSR4-205ENST00000447375 CES3Q6UWW8 571 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 PACS1Q6VY07 963 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 HOOK3Q86VS8 718 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 MPP5Q8N3R9 675 aa12.13□□□□□ -0.47
SSR4-205ENST00000447375 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.13□□□□□ -0.47
SSR4-205ENST00000447375 SH3KBP1Q96B97 665 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms