RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SAMSN1Q9NSI8 373 aaKnown RBP4.82□□□□□ -1.64
SDCBP-205ENST00000447267 IL36AQ9UHA7 158 aa4.82□□□□□ -1.64
SDCBP-205ENST00000447267 VWA7Q9Y334 891 aa4.82□□□□□ -1.64
SDCBP-205ENST00000447267 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-205ENST00000447267 EPN1Q9Y6I3 576 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-205ENST00000447267 TENM1Q9UKZ4 2725 aa4.82□□□□□ -1.64
SDCBP-205ENST00000447267 TRPM6Q9BX84 2022 aa4.82□□□□□ -1.64
SDCBP-205ENST00000447267 A0A1W2PRX2 142 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 C16orf96A6NNT2 1141 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 PEX12O00623 359 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 TOR1BO14657 336 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 NEMFO60524 1076 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 RASSF9O75901 435 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 RASAL1O95294 804 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 EML2O95834 649 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 CRYABP02511 175 aaKnown RBP4.81□□□□□ -1.64
SDCBP-205ENST00000447267 RAB40ALP0C0E4 278 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 ANKRD34CP0C6C1 535 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 FAM200BP0CF97 657 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 MUTP22033 750 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 CHRNB4P30926 498 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 PTTG1IPP53801 180 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 SOX8P57073 446 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 YWHAGP61981 247 aaKnown RBP eCLIP4.81□□□□□ -1.64
SDCBP-205ENST00000447267 CCT2P78371 535 aaKnown RBP4.81□□□□□ -1.64
SDCBP-205ENST00000447267 POU5F1Q01860 360 aaKnown RBP4.81□□□□□ -1.64
SDCBP-205ENST00000447267 APBA1Q02410 837 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 DPTQ07507 201 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 OLIG2Q13516 323 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 RAPGEF1Q13905 1077 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 MS4A13Q5J8X5 152 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 PLEKHS1Q5SXH7 462 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 KIAA0930Q6ICG6 404 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-205ENST00000447267 SLFN12LQ6IEE8 588 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 IL17RELQ6ZVW7 336 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 KCNK18Q7Z418 384 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 LGI2Q8N0V4 545 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 RPRMLQ8N4K4 120 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 LRRC17Q8N6Y2 441 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 ARIH2OSQ8N7S6 290 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 ANKRD53Q8N9V6 530 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 POMGNT1Q8WZA1 660 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 TAF4BQ92750 862 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 SLC7A6OSQ96CW6 309 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-205ENST00000447267 ALG14Q96F25 216 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 PPP1R16AQ96I34 528 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 PKP2Q99959 881 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 TRIM7Q9C029 511 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 SLC6A15Q9H2J7 730 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 EPS8L2Q9H6S3 715 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 SMYD3Q9H7B4 428 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 ZNF696Q9H7X3 374 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 WASH6PQ9NQA3 447 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 GPRC5BQ9NZH0 403 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 H2AFY2Q9P0M6 372 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-205ENST00000447267 SAE1Q9UBE0 346 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-205ENST00000447267 XPO7Q9UIA9 1087 aaKnown RBP4.81□□□□□ -1.64
SDCBP-205ENST00000447267 RARRES3Q9UL19 164 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 HERC2O95714 4834 aa4.81□□□□□ -1.64
SDCBP-205ENST00000447267 HRNRQ86YZ3 2850 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-205ENST00000447267 GRID2IPA4D2P6 1211 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 NPIPA5E9PKD4 350 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 K7ENM7 598 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 IRAK2O43187 625 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 HTRA2O43464 458 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-205ENST00000447267 SNAP91O60641 907 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 PRPF6O94906 941 aaKnown RBP4.8□□□□□ -1.64
SDCBP-205ENST00000447267 DEXIO95424 95 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 LATS1O95835 1130 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 STATHP02808 62 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 MCM7P33993 719 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 SLC11A2P49281 568 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 DNA2P51530 1060 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 BPIFB4P59827 614 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 ANAPC15P60006 121 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 TNNC1P63316 161 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 ARG2P78540 354 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 TUBB3Q13509 450 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 HDAC1Q13547 482 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-205ENST00000447267 MYLK3Q32MK0 819 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 FAM198BQ6UWH4 519 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 BRSK2Q8IWQ3 736 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 ELOA2Q8IYF1 753 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-205ENST00000447267 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.8□□□□□ -1.64
SDCBP-205ENST00000447267 ERMNQ8TAM6 284 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 SLC37A2Q8TED4 501 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 ZNF483Q8TF39 744 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-205ENST00000447267 ANKRD36BP1Q96IX9 119 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 GSDMCQ9BYG8 508 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 TTYH3Q9C0H2 523 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 SDCBP2Q9H190 292 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 INTS13Q9NVM9 706 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 TMEM51Q9NW97 253 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 RBAKQ9NYW8 714 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-205ENST00000447267 OGFRQ9NZT2 677 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 HMGXB4Q9UGU5 601 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 DNAI1Q9UI46 699 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 NPIPA1Q9UND3 350 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 DNM3Q9UQ16 869 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms