RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 OGFOD3Q6PK18 319 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 CCDC91Q7Z6B0 441 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 TRIM48Q8IWZ4 208 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 SLC35F3Q8IY50 421 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 SFRP1Q8N474 314 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 MAPK15Q8TD08 544 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 ASB11Q8WXH4 323 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 DLG3Q92796 817 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 PTERQ96BW5 349 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 CABS1Q96KC9 395 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 FOPNLQ96NB1 174 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 GPR78Q96P69 363 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 HGH1Q9BTY7 390 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 NOVA2Q9UNW9 492 aaKnown RBP17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 PCDHGB2Q9Y5G2 931 aa17.54■□□□□ 0.4
TRAPPC4-203ENST00000447216 KIR2DS5A0A0G2JLQ3 304 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 A0A0G2JNG1 304 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 ARHGEF33A8MVX0 844 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 KIR2DS3K7RE56 304 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 SPAG7O75391 227 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 PSIP1O75475 530 aaKnown RBP17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 SLC2A4P14672 509 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 TFEBP19484 476 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 UBE2IP63279 158 aaKnown RBP17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 SLC18A2Q05940 514 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 KRT33BQ14525 404 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 KIR2DS5Q14953 304 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 SUZ12Q15022 739 aaKnown RBP17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 OR4D1Q15615 310 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 FAM83EQ2M2I3 478 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 C16orf46Q6P387 395 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 UNC5DQ6UXZ4 953 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 UBE2R2Q712K3 238 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 EXOC3L1Q86VI1 746 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 RASGRP3Q8IV61 690 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 CNPY4Q8N129 248 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 ARL14Q8N4G2 192 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 GPR156Q8NFN8 814 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 JPH3Q8WXH2 748 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 SCYL1Q96KG9 808 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 NRTNQ99748 197 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 SH3GL2Q99962 352 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 ALG9Q9H6U8 611 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 NMRAL1Q9HBL8 299 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 CPNE7Q9UBL6 633 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 TDRKHQ9Y2W6 561 aaKnown RBP17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 UNC13CQ8NB66 2214 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 ZNF292O60281 2723 aa17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 SNRNP200O75643 2136 aaKnown RBP17.53■□□□□ 0.4
TRAPPC4-203ENST00000447216 OR5K4A6NMS3 321 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 GFYI3L273 518 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 OPA1O60313 960 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 C1orf105O95561 183 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 VIPP01282 170 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 COL6A2P12110 1019 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 CD59P13987 128 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 SLC26A3P40879 764 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 ATP6V0D1P61421 351 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 PHKG1Q16816 387 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 C14orf28Q4W4Y0 310 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 TTMPQ5BVD1 217 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 AGBL2Q5U5Z8 902 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 ZCCHC8Q6NZY4 707 aaKnown RBP17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 CDHR3Q6ZTQ4 885 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 C17orf82Q86X59 251 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 ZNF761Q86XN6 746 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 ARL10Q8N8L6 244 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 SETD7Q8WTS6 366 aaKnown RBP17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 EXT2Q93063 718 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 TLCD1Q96CP7 247 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 APOLD1Q96LR9 279 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 TSNARE1Q96NA8 513 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 DUSP23Q9BVJ7 150 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 TRIT1Q9H3H1 467 aaKnown RBP17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 C12orf65Q9H3J6 166 aaKnown RBP17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 ACBD3Q9H3P7 528 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 PLAGL1Q9UM63 463 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 HEBP2Q9Y5Z4 205 aa17.52■□□□□ 0.4
TRAPPC4-203ENST00000447216 LY6G6EA0A0G2JKS1 128 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 COPEO14579 308 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 CATP04040 527 aaKnown RBP17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 C8GP07360 202 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 XRCC1P18887 633 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 PTPRZ1P23471 2315 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 KCNC1P48547 511 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 HHEXQ03014 270 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 STPG1Q5TH74 334 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 SBSNQ6UWP8 590 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 MBOAT1Q6ZNC8 495 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 ISCA2Q86U28 154 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 SLC9B2Q86UD5 537 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 TBC1D21Q8IYX1 336 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 GOLGA6L1Q8N7Z2 621 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 BANPQ8N9N5 519 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 OR5K2Q8NHB8 316 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 KIAA1191Q96A73 305 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 CAMK1GQ96NX5 476 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 SMC6Q96SB8 1091 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 STMN4Q9H169 189 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms