RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 GPC3P51654 580 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 LIMK1P53667 647 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 NME5P56597 212 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 DSCR9P59020 149 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 PPP2R2BQ00005 443 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 HSPB3Q12988 150 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 KBTBD12Q3ZCT8 623 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 KLHL26Q53HC5 615 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 KCNT1Q5JUK3 1230 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 SIGIRRQ6IA17 410 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 PAPD4Q6PIY7 484 aaKnown RBP4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZBTB49Q6ZSB9 765 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 CLYBLQ8N0X4 340 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 SPATA22Q8NHS9 363 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 OCC1Q8TAD7 63 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 RND1Q92730 232 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 MS4A10Q96PG2 267 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZPBPQ9BS86 351 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZNF350Q9GZX5 532 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 LIN28AQ9H9Z2 209 aaKnown RBP4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 DNAJC17Q9NVM6 304 aaKnown RBP4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 CYP39A1Q9NYL5 469 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 NINJ2Q9NZG7 142 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 C1RLQ9NZP8 487 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 ACTR3BQ9P1U1 418 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 TRPC4Q9UBN4 977 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 XPO7Q9UIA9 1087 aaKnown RBP4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 PIN4Q9Y237 131 aaKnown RBP4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 CHKBQ9Y259 395 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 TRIM17Q9Y577 477 aa4.32□□□□□ -1.72
HMGB1P48-201ENST00000446155 ATXN2Q99700 1313 aaKnown RBP4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 SYCE3A1L190 88 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 TMEM8BA6NDV4 472 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 C5orf52A6NGY3 159 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 SOCS6O14544 535 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZBTB43O43298 467 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 REC8O95072 547 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 RLN1P04808 185 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 GNAZP19086 355 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 ITIH1P19827 911 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 EEF1B2P24534 225 aaKnown RBP4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 CCKARP32238 428 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 STX2P32856 288 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZNF75DP51815 510 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 CASP9P55211 416 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 HNRNPH2P55795 449 aaKnown RBP4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 UBASH3AP57075 661 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 SEC61BP60468 96 aaKnown RBP4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 TUBA1BP68363 451 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 HTD2P86397 168 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 KEAP1Q14145 624 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 HLFQ16534 295 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 FUT11Q495W5 492 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 GGNBP1Q5YKI7 109 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 MEPCEQ7L2J0 689 aaKnown RBP4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 CACNA2D4Q7Z3S7 1137 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 CCDC190Q86UF4 302 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 TMEM173Q86WV6 379 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 UXS1Q8NBZ7 420 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZBTB44Q8NCP5 570 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 LPCAT1Q8NF37 534 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 OR2AK2Q8NG84 335 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 ST7LQ8TDW4 575 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 TMED6Q8WW62 240 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 SCMH1Q96GD3 660 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 GAL3ST4Q96RP7 486 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 SMC6Q96SB8 1091 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 HNRNPABQ99729 332 aaKnown RBP4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 MAGIXQ9H6Y5 334 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 OCIAD1Q9NX40 245 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 VPS18Q9P253 973 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 OR14J1Q9UGF5 321 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 DBNLQ9UJU6 430 aaKnown RBP4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 ACSL5Q9ULC5 683 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 STX8Q9UNK0 236 aa4.31□□□□□ -1.72
HMGB1P48-201ENST00000446155 ACEP12821 1306 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 hDV102S1A0JD36 115 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 RGSL1A5PLK6 1076 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 YDJCA8MPS7 323 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 ST8SIA3O43173 380 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 RFPL2O75678 378 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 MOCS3O95396 460 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 CD27P26842 260 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 NMBRP28336 390 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 FASLGP48023 281 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 HNRNPKP61978 463 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 KLHL30Q0D2K2 578 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 MYBPHQ13203 477 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 XKR9Q5GH70 373 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 MDH1BQ5I0G3 518 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 FAM198BQ6UWH4 519 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 NHLRC1Q6VVB1 395 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 NRROSQ86YC3 692 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 FAM219AQ8IW50 185 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 DSELQ8IZU8 1212 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 MRPL43Q8N983 215 aaKnown RBP4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZNF540Q8NDQ6 660 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 OR1J2Q8NGS2 313 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms