RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 PDK2Q15119 407 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 PLEKHN1Q494U1 663 aaPredicted RBP7.73□□□□□ -1.17
LINC02549-201ENST00000445346 FILIP1LQ4L180 1135 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 KHDC1Q4VXA5 237 aaKnown RBP7.73□□□□□ -1.17
LINC02549-201ENST00000445346 PLEKHS1Q5SXH7 462 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 MEI1Q5TIA1 1274 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 VWA5B1Q5TIE3 1220 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 PRAMEF17Q5VTA0 474 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 C1QL3Q5VWW1 255 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 LYPLAL1Q5VWZ2 237 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 NT5DC3Q86UY8 548 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 RAB43Q86YS6 212 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 TICAM1Q8IUC6 712 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 DSELQ8IZU8 1212 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 SLC34A3Q8N130 599 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 NIPA2Q8N8Q9 360 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 GLIS1Q8NBF1 620 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 GPR150Q8NGU9 434 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 ZNF501Q96CX3 271 aaPredicted RBP7.73□□□□□ -1.17
LINC02549-201ENST00000445346 HDAC11Q96DB2 347 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 LRFN5Q96NI6 719 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 VPS35Q96QK1 796 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 SRPK1Q96SB4 655 aaKnown RBP7.73□□□□□ -1.17
LINC02549-201ENST00000445346 SMAD5Q99717 465 aaKnown RBP7.73□□□□□ -1.17
LINC02549-201ENST00000445346 XPO4Q9C0E2 1151 aaKnown RBP7.73□□□□□ -1.17
LINC02549-201ENST00000445346 THAP2Q9H0W7 228 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 ISCUQ9H1K1 167 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 ACSS3Q9H6R3 686 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 CBX8Q9HC52 389 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 C5AR2Q9P296 337 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 B3GNT3Q9Y2A9 372 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 COPG1Q9Y678 874 aaKnown RBP7.73□□□□□ -1.17
LINC02549-201ENST00000445346 CFAP20Q9Y6A4 193 aaKnown RBP7.73□□□□□ -1.17
LINC02549-201ENST00000445346 SHANK1Q9Y566 2161 aa7.73□□□□□ -1.17
LINC02549-201ENST00000445346 MED13Q9UHV7 2174 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 TMEM150CB9EJG8 249 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 C9J4A7 227 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 PEX12O00623 359 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 KLHL41O60662 606 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 F13BP05160 661 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 MTHFD1P11586 935 aaKnown RBP7.72□□□□□ -1.17
LINC02549-201ENST00000445346 CYP2A7P20853 494 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 AGXTP21549 392 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 CDH3P22223 829 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 OTX2P32243 289 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 NTF4P34130 210 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 PRKCIP41743 596 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ARCN1P48444 511 aaKnown RBP7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ADCY2Q08462 1091 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ATP1A4Q13733 1029 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 NFKBIBQ15653 356 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 PPP2R5EQ16537 467 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ATP13A5Q4VNC0 1218 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ATP13A4Q4VNC1 1196 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 FAM69BQ5VUD6 431 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ZDHHC20Q5W0Z9 365 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 LCN10Q6JVE6 187 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 FBXO38Q6PIJ6 1188 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 TMEM220Q6QAJ8 160 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ZNF517Q6ZMY9 492 aaPredicted RBP7.72□□□□□ -1.17
LINC02549-201ENST00000445346 C11orf96Q7Z7L8 435 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ZADH2Q8N4Q0 377 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ZBTB2Q8N680 514 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 SLC38A9Q8NBW4 561 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 CLEC1AQ8NC01 280 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ADAMTS17Q8TE56 1095 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 TM9SF4Q92544 642 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 N4BP2L2Q92802 583 aaPredicted RBP7.72□□□□□ -1.17
LINC02549-201ENST00000445346 FER1L6-AS2Q96M78 137 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 C12orf66Q96MD2 445 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 AGAP3Q96P47 875 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ZNF670Q9BS34 389 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 TLR10Q9BXR5 811 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 KCNF1Q9H3M0 494 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 ACTR5Q9H9F9 607 aaPredicted RBP7.72□□□□□ -1.17
LINC02549-201ENST00000445346 AGPAT4Q9NRZ5 378 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 CRIM1Q9NZV1 1036 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 CHMP5Q9NZZ3 219 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 NFKBIL1Q9UBC1 381 aaPredicted RBP7.72□□□□□ -1.17
LINC02549-201ENST00000445346 SERTAD3Q9UJW9 196 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 PADI2Q9Y2J8 665 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 HEY1Q9Y5J3 304 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 U3KQE9 123 aa7.72□□□□□ -1.17
LINC02549-201ENST00000445346 TEP1Q99973 2627 aaKnown RBP7.71□□□□□ -1.17
LINC02549-201ENST00000445346 ZNF106Q9H2Y7 1883 aaKnown RBP7.71□□□□□ -1.18
LINC02549-201ENST00000445346 ARHGAP10A1A4S6 786 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 GSAPA4D1B5 854 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 SLC9B1P1A6NJY1 282 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 OR2AG2A6NM03 316 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 AURKAO14965 403 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 HNRNPRO43390 633 aaKnown RBP7.71□□□□□ -1.18
LINC02549-201ENST00000445346 LDB2O43679 373 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 IPO13O94829 963 aaKnown RBP7.71□□□□□ -1.18
LINC02549-201ENST00000445346 LCA5LO95447 670 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 NDST3O95803 873 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 IGHEP01854 428 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 SLC35G4P0C7Q5 338 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 POLR2CP19387 275 aaPredicted RBP7.71□□□□□ -1.18
LINC02549-201ENST00000445346 HLA-DPA1P20036 260 aa7.71□□□□□ -1.18
LINC02549-201ENST00000445346 GSTT1P30711 240 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms