RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 DNAJC15Q9Y5T4 150 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 MYOCOSA0A1B0GUC4 107 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 NR2F1P10589 423 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 ZNF829Q3KNS6 432 aaPredicted RBP16.34■□□□□ 0.21
TCOF1-206ENST00000445265 CHST9Q7L1S5 443 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 DBF4BQ8NFT6 615 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 RPF2Q9H7B2 306 aaKnown RBP16.34■□□□□ 0.21
TCOF1-206ENST00000445265 ZC4H2Q9NQZ6 224 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 SATB2Q9UPW6 733 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 PCDHGA7Q9Y5G6 932 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 AIREO43918 545 aa16.33■□□□□ 0.21
TCOF1-206ENST00000445265 RASAL1O95294 804 aa16.33■□□□□ 0.21
TCOF1-206ENST00000445265 MYCLP1P12525 358 aaPredicted RBP16.33■□□□□ 0.21
TCOF1-206ENST00000445265 ISCA2Q86U28 154 aa16.33■□□□□ 0.21
TCOF1-206ENST00000445265 IPCEF1Q8WWN9 437 aaPredicted RBP16.33■□□□□ 0.21
TCOF1-206ENST00000445265 IGSF5Q9NSI5 407 aa16.33■□□□□ 0.21
TCOF1-206ENST00000445265 ARSDP51689 593 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 CDC73Q6P1J9 531 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 OOSP2Q86WS3 158 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 ISOC1Q96CN7 298 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 PHF12Q96QT6 1004 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 GPATCH1Q9BRR8 931 aaKnown RBP16.33■□□□□ 0.2
TCOF1-206ENST00000445265 RETREG1Q9H6L5 497 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 GKN1Q9NS71 199 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 BMP2P12643 396 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 RPL17P18621 184 aaKnown RBP16.33■□□□□ 0.2
TCOF1-206ENST00000445265 UBXN11Q5T124 520 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 CYP2U1Q7Z449 544 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 COLGALT2Q8IYK4 626 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 CYP2S1Q96SQ9 504 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 EBPLQ9BY08 206 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 SSR3Q9UNL2 185 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 LOXHD1Q8IVV2 1947 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 IQCF5A8MTL0 148 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 ABCB7O75027 752 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 HNMTP50135 292 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 C1QTNF8P60827 252 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 ABHD18Q0P651 414 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 MOGQ16653 247 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 POM121L1PQ3SYA9 428 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 PIK3R6Q5UE93 754 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 LCN8Q6JVE9 175 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 ARL14EPQ8N8R7 260 aaPredicted RBP16.33■□□□□ 0.2
TCOF1-206ENST00000445265 OSBPL10Q9BXB5 764 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 ASF1AQ9Y294 204 aa16.33■□□□□ 0.2
TCOF1-206ENST00000445265 SNPHO15079 494 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 EIF2S1P05198 315 aaKnown RBP16.32■□□□□ 0.2
TCOF1-206ENST00000445265 EBLN1P0CF75 366 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 PRKAG1P54619 331 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 IRF5Q13568 498 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 USP39Q53GS9 565 aaKnown RBP16.32■□□□□ 0.2
TCOF1-206ENST00000445265 MED27Q6P2C8 311 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 CHCHD4Q8N4Q1 142 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 TRIM63Q969Q1 353 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 MRPL48Q96GC5 212 aaKnown RBP16.32■□□□□ 0.2
TCOF1-206ENST00000445265 NSUN3Q9H649 340 aaKnown RBP16.32■□□□□ 0.2
TCOF1-206ENST00000445265 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.32■□□□□ 0.2
TCOF1-206ENST00000445265 ZDHHC3Q9NYG2 299 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 GULP1Q9UBP9 304 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 NR2F6P10588 404 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 AGTR2P50052 363 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 TAB1Q15750 504 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 PLEKHM3Q6ZWE6 761 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 SUSD6Q92537 303 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 TCF25Q9BQ70 676 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 SYT17Q9BSW7 474 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 ASB3Q9Y575 518 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 A0A1W2PPW3 197 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 CCNDBP1O95273 360 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 CLIC3O95833 236 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 CLTBP09497 229 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 DNAJA1P31689 397 aaKnown RBP16.32■□□□□ 0.2
TCOF1-206ENST00000445265 CSKP41240 450 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 MVKQ03426 396 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 OR2T5Q6IEZ7 315 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 LRRC70Q7Z2Q7 622 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 SERINC5Q86VE9 423 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 OR8J3Q8NGG0 315 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 OR2T29Q8NH02 315 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 HPS1Q92902 700 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 SLC38A2Q96QD8 506 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 DUSP26Q9BV47 211 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 AASDHPPTQ9NRN7 309 aa16.32■□□□□ 0.2
TCOF1-206ENST00000445265 EEDO75530 441 aaKnown RBP16.31■□□□□ 0.2
TCOF1-206ENST00000445265 CCR3P51677 355 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 MANFP55145 182 aaKnown RBP16.31■□□□□ 0.2
TCOF1-206ENST00000445265 C2orf80Q0P641 193 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 SPANXN4Q5MJ08 99 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.31■□□□□ 0.2
TCOF1-206ENST00000445265 ZNF614Q8N883 585 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 CXorf40AQ8TE69 158 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 STON2Q8WXE9 905 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 NACC2Q96BF6 587 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 PRICKLE1Q96MT3 831 aaPredicted RBP16.31■□□□□ 0.2
TCOF1-206ENST00000445265 COPS4Q9BT78 406 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 HDHD2Q9H0R4 259 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 MAGEE1Q9HCI5 957 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 MTMR11A4FU01 709 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 HAS3O00219 553 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 CLIC1O00299 241 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms