RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 LACRTQ9GZZ8 138 aa14.96□□□□□ -0.01
SEC13-213ENST00000445064 VPS37BQ9H9H4 285 aa14.96□□□□□ -0.01
SEC13-213ENST00000445064 LRRC4CQ9HCJ2 640 aa14.96□□□□□ -0.01
SEC13-213ENST00000445064 ACTR10Q9NZ32 417 aa14.96□□□□□ -0.01
SEC13-213ENST00000445064 SMARCAL1Q9NZC9 954 aa14.96□□□□□ -0.01
SEC13-213ENST00000445064 REXO2Q9Y3B8 237 aaKnown RBP14.96□□□□□ -0.01
SEC13-213ENST00000445064 FLNCQ14315 2725 aa14.96□□□□□ -0.01
SEC13-213ENST00000445064 CCDC78A2IDD5 438 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 E7EQ34 232 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 H7C0S8 307 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 CEACAM4O75871 244 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 MSL3P1P0C860 447 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 VAV2P52735 878 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 RPA4Q13156 261 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 DBN1Q16643 649 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 FAM198BQ6UWH4 519 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 NAPRTQ6XQN6 538 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 ARHGEF18Q6ZSZ5 1173 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 OR5AR1Q8NGP9 310 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 STYXQ8WUJ0 223 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 CALR3Q96L12 384 aaKnown RBP14.95□□□□□ -0.02
SEC13-213ENST00000445064 NUDT9Q9BW91 350 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 MFRPQ9BY79 579 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 FAM60AQ9NP50 221 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 LUZP4Q9P127 313 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 ICKQ9UPZ9 632 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 ZNF451Q9Y4E5 1061 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 MAP4K5Q9Y4K4 846 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 PRSS21Q9Y6M0 314 aa14.95□□□□□ -0.02
SEC13-213ENST00000445064 RELNP78509 3460 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 OR51F1A6NGY5 319 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 HCRTR1O43613 425 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 PTMAP06454 111 aaKnown RBP14.94□□□□□ -0.02
SEC13-213ENST00000445064 CACNG1Q06432 222 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 RAD9BQ6WBX8 426 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 UNC5AQ6ZN44 842 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 MED25Q71SY5 747 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 TRIM73Q86UV7 250 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 HOOK3Q86VS8 718 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 TMTC1Q8IUR5 882 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 LRRC57Q8N9N7 239 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 GALNT11Q8NCW6 608 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 N4BP2L2Q92802 583 aaPredicted RBP14.94□□□□□ -0.02
SEC13-213ENST00000445064 PANX2Q96RD6 677 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 SPRTNQ9H040 489 aaPredicted RBP14.94□□□□□ -0.02
SEC13-213ENST00000445064 PACSIN2Q9UNF0 486 aaPredicted RBP14.94□□□□□ -0.02
SEC13-213ENST00000445064 ASF1AQ9Y294 204 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 MED13Q9UHV7 2174 aa14.94□□□□□ -0.02
SEC13-213ENST00000445064 GRID2IPA4D2P6 1211 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 BTNL10A8MVZ5 291 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 SORBS2O94875 1100 aaKnown RBP14.93□□□□□ -0.02
SEC13-213ENST00000445064 AP2A2O94973 939 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 TPBGLP0DKB5 382 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 CBSLP0DN79 551 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 UGT2B7P16662 529 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 AGXTP21549 392 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 CBSP35520 551 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 GDF10P55107 478 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 RAPSNQ13702 412 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 ATP1A4Q13733 1029 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 NCF4Q15080 339 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 INPP5JQ15735 1006 aaPredicted RBP14.93□□□□□ -0.02
SEC13-213ENST00000445064 ZIC1Q15915 447 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 DEFB110Q30KQ9 67 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 PRR30Q53SZ7 412 aaPredicted RBP14.93□□□□□ -0.02
SEC13-213ENST00000445064 FHL5Q5TD97 284 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 C1orf189Q5VU69 101 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 MLIPQ5VWP3 458 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 ZNF385CQ66K41 422 aaPredicted RBP14.93□□□□□ -0.02
SEC13-213ENST00000445064 JMJD6Q6NYC1 403 aaPredicted RBP14.93□□□□□ -0.02
SEC13-213ENST00000445064 SPESP1Q6UW49 350 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 GPR135Q8IZ08 494 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 TMEM102Q8N9M5 508 aaPredicted RBP14.93□□□□□ -0.02
SEC13-213ENST00000445064 TTC13Q8NBP0 860 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 ACRBPQ8NEB7 543 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 ELMO1Q92556 727 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 ALS2CR12Q96Q35 445 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 OR2A14Q96R47 310 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 TMEM121Q9BTD3 319 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 LRRC40Q9H9A6 602 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 SPHK1Q9NYA1 384 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 AMFRQ9UKV5 643 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 TDRKHQ9Y2W6 561 aaKnown RBP14.93□□□□□ -0.02
SEC13-213ENST00000445064 PCDHGB7Q9Y5F8 929 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 SPTBP11277 2137 aa14.93□□□□□ -0.02
SEC13-213ENST00000445064 MAST4O15021 2626 aa14.92□□□□□ -0.02
SEC13-213ENST00000445064 GOLGA6L9A6NEM1 432 aa14.92□□□□□ -0.02
SEC13-213ENST00000445064 MROH6A6NGR9 719 aa14.92□□□□□ -0.02
SEC13-213ENST00000445064 C9J4A7 227 aa14.92□□□□□ -0.02
SEC13-213ENST00000445064 LIN7AO14910 233 aaPredicted RBP14.92□□□□□ -0.02
SEC13-213ENST00000445064 PSMD3O43242 534 aa14.92□□□□□ -0.02
SEC13-213ENST00000445064 DPM1O60762 260 aa14.92□□□□□ -0.02
SEC13-213ENST00000445064 AGFG2O95081 481 aa14.92□□□□□ -0.02
SEC13-213ENST00000445064 IPO7O95373 1038 aaKnown RBP14.92□□□□□ -0.02
SEC13-213ENST00000445064 CTSBP07858 339 aa14.92□□□□□ -0.02
SEC13-213ENST00000445064 HBQ1P09105 142 aa14.92□□□□□ -0.02
SEC13-213ENST00000445064 GSTM1P09488 218 aa14.92□□□□□ -0.02
SEC13-213ENST00000445064 MSNP26038 577 aaKnown RBP14.92□□□□□ -0.02
SEC13-213ENST00000445064 ACADLP28330 430 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms