RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PATE1Q8WXA2 126 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 LINGO1Q96FE5 620 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 TLK1Q9UKI8 766 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 ACSL5Q9ULC5 683 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 RUVBL2Q9Y230 463 aaKnown RBP16.82■□□□□ 0.28
LIME1-202ENST00000444951 CFAP20Q9Y6A4 193 aaKnown RBP16.82■□□□□ 0.28
LIME1-202ENST00000444951 A0A1W2PPM1 405 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 GOLGA8RI6L899 631 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 GPC4O75487 556 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 MT-ND3P03897 115 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 CRABP2P29373 138 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 HALP42357 657 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 RGS4P49798 205 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 SOWAHCQ53LP3 525 aaPredicted RBP16.81■□□□□ 0.28
LIME1-202ENST00000444951 TAF1BQ53T94 588 aaPredicted RBP16.81■□□□□ 0.28
LIME1-202ENST00000444951 TMEM207Q6UWW9 146 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 PIWIL4Q7Z3Z4 852 aaKnown RBP16.81■□□□□ 0.28
LIME1-202ENST00000444951 TMPRSS12Q86WS5 348 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 GLMNQ92990 594 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 MTBPQ96DY7 904 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 RMDN2Q96LZ7 410 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 C12orf66Q96MD2 445 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 TMEM109Q9BVC6 243 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 OR52A5Q9H2C5 316 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 LATS2Q9NRM7 1088 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 IMP3Q9NV31 184 aaKnown RBP16.81■□□□□ 0.28
LIME1-202ENST00000444951 SCHIP1Q9P0W5 487 aaPredicted RBP16.81■□□□□ 0.28
LIME1-202ENST00000444951 CDYLQ9Y232 598 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 CSNK1G3Q9Y6M4 447 aa16.81■□□□□ 0.28
LIME1-202ENST00000444951 A0A096LPK6 155 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 PRR19A6NJB7 356 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 OR52A4PA6NMU1 304 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 IFRD1O00458 451 aaPredicted RBP16.8■□□□□ 0.28
LIME1-202ENST00000444951 TRIM38O00635 465 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 RGS16O15492 202 aaPredicted RBP16.8■□□□□ 0.28
LIME1-202ENST00000444951 SLCO2B1O94956 709 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 C2P06681 752 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 SLC35E2BP0CK96 405 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 CCDC166P0CW27 439 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 F3P13726 295 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 CD9P21926 228 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 IL2P60568 153 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 IRF9Q00978 393 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 PLOD1Q02809 727 aaPredicted RBP16.8■□□□□ 0.28
LIME1-202ENST00000444951 RPA4Q13156 261 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 CLCA4Q14CN2 919 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 ZKSCAN8Q15776 578 aaPredicted RBP16.8■□□□□ 0.28
LIME1-202ENST00000444951 HES3Q5TGS1 186 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 DUS1LQ6P1R4 473 aaKnown RBP16.8■□□□□ 0.28
LIME1-202ENST00000444951 SLC22A15Q8IZD6 547 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 PHC3Q8NDX5 983 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 ANKRD49Q8WVL7 239 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 ANKRD7Q92527 254 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 BBC3Q96PG8 261 aaPredicted RBP16.8■□□□□ 0.28
LIME1-202ENST00000444951 INSM2Q96T92 566 aaPredicted RBP16.8■□□□□ 0.28
LIME1-202ENST00000444951 POPDC3Q9HBV1 291 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 SYTL2Q9HCH5 934 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 PCMTD2Q9NV79 361 aa16.8■□□□□ 0.28
LIME1-202ENST00000444951 TLX3O43711 291 aaPredicted RBP16.79■□□□□ 0.28
LIME1-202ENST00000444951 RFPL1O75677 317 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 ALPPL2P10696 532 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 MYF5P13349 255 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 JUPP14923 745 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 BRAFP15056 766 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 ZNF37AP17032 561 aaPredicted RBP16.79■□□□□ 0.28
LIME1-202ENST00000444951 TARDBPQ13148 414 aaKnown RBP eCLIP16.79■□□□□ 0.28
LIME1-202ENST00000444951 CSHL1Q14406 222 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 KRT33BQ14525 404 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 RPE65Q16518 533 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 PROX2Q3B8N5 592 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 TBC1D1Q86TI0 1168 aaPredicted RBP16.79■□□□□ 0.28
LIME1-202ENST00000444951 MYO1HQ8N1T3 1032 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 SDR16C5Q8N3Y7 309 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 RIBC1Q8N443 379 aaPredicted RBP16.79■□□□□ 0.28
LIME1-202ENST00000444951 NKAPQ8N5F7 415 aaKnown RBP16.79■□□□□ 0.28
LIME1-202ENST00000444951 MZB1Q8WU39 189 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 CXorf40BQ96DE9 158 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 EURLQ9NYK6 297 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 KLHL42Q9P2K6 505 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 LGALS13Q9UHV8 139 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 ACOT9Q9Y305 439 aa16.79■□□□□ 0.28
LIME1-202ENST00000444951 A0A087WV48 116 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 A0A087X1B8 175 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 PRAMEF33A0A0G2JMD5 474 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 A6NCN8 305 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 GOLGA6L10A6NI86 522 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 SIGLEC6O43699 453 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 MPOP05164 745 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 MYZAPP0CAP1 466 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 CBSLP0DN79 551 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 PYGBP11216 843 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 CBSP35520 551 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 MAZP56270 477 aaKnown RBP16.78■□□□□ 0.28
LIME1-202ENST00000444951 BIRC2Q13490 618 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 GBX1Q14549 363 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 RASA2Q15283 850 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 AGAP9Q5VTM2 703 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 IYDQ6PHW0 289 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 LVRNQ6Q4G3 990 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 ABRAXAS1Q6UWZ7 409 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms