RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 FOPNLQ96NB1 174 aa16.29■□□□□ 0.2
TSPAN9-204ENST00000444315 BBC3Q96PG8 261 aaPredicted RBP16.29■□□□□ 0.2
TSPAN9-204ENST00000444315 CCDC68Q9H2F9 335 aa16.29■□□□□ 0.2
TSPAN9-204ENST00000444315 MRM3Q9HC36 420 aaKnown RBP16.29■□□□□ 0.2
TSPAN9-204ENST00000444315 FGF21Q9NSA1 209 aa16.29■□□□□ 0.2
TSPAN9-204ENST00000444315 MARCH4Q9P2E8 410 aaPredicted RBP16.29■□□□□ 0.2
TSPAN9-204ENST00000444315 PILRAQ9UKJ1 303 aa16.29■□□□□ 0.2
TSPAN9-204ENST00000444315 PLAGL1Q9UM63 463 aa16.29■□□□□ 0.2
TSPAN9-204ENST00000444315 SOX13Q9UN79 622 aa16.29■□□□□ 0.2
TSPAN9-204ENST00000444315 RPS6KL1Q9Y6S9 549 aa16.29■□□□□ 0.2
TSPAN9-204ENST00000444315 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 PIPSLA2A3N6 862 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 SLC9B1P1A6NJY1 282 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 IQCF5A8MTL0 148 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 KPNA5O15131 536 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 AVILO75366 819 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 SPAG6O75602 509 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 FOLR1P15328 257 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 PSMA3P25788 255 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 FMO4P31512 558 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 DLSTP36957 453 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 ABHD18Q0P651 414 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 C19orf57Q0VDD7 668 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 ABRQ12979 859 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 DHX34Q14147 1143 aaKnown RBP16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 LY6DQ14210 128 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 GPR19Q15760 415 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 ANKRD22Q5VYY1 191 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 LRRC6Q86X45 466 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 EXTL1Q92935 676 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 CARD6Q9BX69 1037 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 KLHL25Q9H0H3 589 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 ACTR10Q9NZ32 417 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 POMT2Q9UKY4 750 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 SLC39A10Q9ULF5 831 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 PCDHB3Q9Y5E6 796 aa16.28■□□□□ 0.2
TSPAN9-204ENST00000444315 IGSF10Q6WRI0 2623 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 LOC101059948A0A1B0GTJ6 334 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 SDR42E2A6NKP2 422 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 ISM1B1AKI9 464 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 TK2O00142 265 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 CES2O00748 559 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 SCRG1O75711 98 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 ATXN8OSP0DMR3 200 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 FGF5P12034 268 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 ZNF28P17035 718 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 CYP2A7P20853 494 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 PAFAH1B1P43034 410 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 MC1RQ01726 317 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 DNAJC21Q5F1R6 531 aaKnown RBP16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 KLHL7Q8IXQ5 586 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 PPIL6Q8IXY8 311 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 CARFQ8N187 725 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 LSM14AQ8ND56 463 aaKnown RBP16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 CPT1BQ92523 772 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 FAM136AQ96C01 138 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 SLC41A2Q96JW4 573 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 NAPGQ99747 312 aaPredicted RBP16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 KIFC1Q9BW19 673 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 TFB2MQ9H5Q4 396 aaKnown RBP16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 C1GALT1Q9NS00 363 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 TREX1Q9NSU2 369 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 VPS9D1Q9Y2B5 631 aa16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 TMEM184BQ9Y519 407 aaPredicted RBP16.27■□□□□ 0.2
TSPAN9-204ENST00000444315 SLC5A10A0PJK1 596 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 MAGEB16A2A368 324 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 TMEM150CB9EJG8 249 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 H3BMM5 538 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 BTN3A3O00478 584 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 TMEM63AO94886 807 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 NTRK1P04629 796 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 TCN2P20062 427 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 CHRM3P20309 590 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 PRDX3P30048 256 aaKnown RBP16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 CCR7P32248 378 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 TUBB4BP68371 445 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 TUBB2AQ13885 445 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 CYP1B1Q16678 543 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 KIAA0930Q6ICG6 404 aaPredicted RBP16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 TIPARPQ7Z3E1 657 aaKnown RBP16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 TAX1BP1Q86VP1 789 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 BPHLQ86WA6 291 aaPredicted RBP16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 OR5K2Q8NHB8 316 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 GABPB2Q8TAK5 448 aaPredicted RBP16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 LKAAEAR1Q8TD35 194 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 STARD8Q92502 1023 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 CLIP3Q96DZ5 547 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 SGSM3Q96HU1 749 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 TUBB2BQ9BVA1 445 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 DDX47Q9H0S4 455 aaKnown RBP16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 CIDEBQ9UHD4 219 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 CROTQ9UKG9 612 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 PADI1Q9ULC6 663 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 ICKQ9UPZ9 632 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 CRYL1Q9Y2S2 319 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 MRFAP1Q9Y605 127 aa16.26■□□□□ 0.19
TSPAN9-204ENST00000444315 USP27XA6NNY8 438 aa16.25■□□□□ 0.19
TSPAN9-204ENST00000444315 CPNE3O75131 537 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms