RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 TRABD2AQ86V40 505 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 LCA5Q86VQ0 697 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 SFTPA2Q8IWL1 248 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 RBM12BQ8IXT5 1001 aaKnown RBP15.39■□□□□ 0.05
USP40-206ENST00000443711 SLC35F3Q8IY50 421 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 TBC1D21Q8IYX1 336 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 ARL14Q8N4G2 192 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 SPATA6LQ8N4H0 392 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 MAGEC3Q8TD91 643 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 RHBDD1Q8TEB9 315 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 SLC37A2Q8TED4 501 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 KCTD4Q8WVF5 259 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 ZFPM2Q8WW38 1151 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 NXNL1Q96CM4 212 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 POT1Q9NUX5 634 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 PCMTD2Q9NV79 361 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 EVA1BQ9NVM1 165 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 POLG2Q9UHN1 485 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 PADI4Q9UM07 663 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 RUVBL2Q9Y230 463 aaKnown RBP15.39■□□□□ 0.05
USP40-206ENST00000443711 BTBD3Q9Y2F9 522 aa15.39■□□□□ 0.05
USP40-206ENST00000443711 FOXO6A8MYZ6 492 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 GFYI3L273 518 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 GOLGA8RI6L899 631 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 AGPSO00116 658 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 BTN3A1O00481 513 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 ZBTB14O43829 449 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 OPA1O60313 960 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 PSIP1O75475 530 aaKnown RBP15.38■□□□□ 0.05
USP40-206ENST00000443711 LDOC1O95751 146 aaPredicted RBP15.38■□□□□ 0.05
USP40-206ENST00000443711 MAP4P27816 1152 aaKnown RBP15.38■□□□□ 0.05
USP40-206ENST00000443711 GMPRP36959 345 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 MAZP56270 477 aaKnown RBP15.38■□□□□ 0.05
USP40-206ENST00000443711 UBE2IP63279 158 aaKnown RBP15.38■□□□□ 0.05
USP40-206ENST00000443711 HHEXQ03014 270 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 DLG1Q12959 904 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 SP140Q13342 867 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 NR0B2Q15466 257 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 TSNAXIP1Q2TAA8 658 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 KLC3Q6P597 504 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 UBE2R2Q712K3 238 aaPredicted RBP15.38■□□□□ 0.05
USP40-206ENST00000443711 CLEC14AQ86T13 490 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 RASGRP3Q8IV61 690 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 SRRM1Q8IYB3 904 aaKnown RBP15.38■□□□□ 0.05
USP40-206ENST00000443711 CENPLQ8N0S6 344 aaPredicted RBP15.38■□□□□ 0.05
USP40-206ENST00000443711 KYQ8NBH2 561 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 OR6C4Q8NGE1 309 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 OR5AR1Q8NGP9 310 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 OR5K2Q8NHB8 316 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 MCOLN3Q8TDD5 553 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 SH3KBP1Q96B97 665 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 ZBTB9Q96C00 473 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 APOLD1Q96LR9 279 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 TRIM54Q9BYV2 358 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 TMBIM4Q9HC24 238 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 SLC40A1Q9NP59 571 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 IGSF5Q9NSI5 407 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 ZNF446Q9NWS9 450 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 SENP1Q9P0U3 644 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 DCDC2Q9UHG0 476 aa15.38■□□□□ 0.05
USP40-206ENST00000443711 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 CCDC189A1A4V9 331 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 PABPN1LA6NDY0 278 aaKnown RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 RHPN2P1A8MT19 583 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 CDC7O00311 574 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 SH3BP5O60239 455 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 KDM1AO60341 852 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 C1orf105O95561 183 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 GSTA1P08263 222 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 KRT4P19013 534 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 CYP2A7P20853 494 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 FASLGP48023 281 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 DUSP3P51452 185 aaPredicted RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 KPNA2P52292 529 aaKnown RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 LIMK1P53667 647 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 SLC18A2Q05940 514 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 ACAP2Q15057 778 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 PROX2Q3B8N5 592 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 TNFAIP8L3Q5GJ75 292 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 DUS1LQ6P1R4 473 aaKnown RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 SH2D5Q6ZV89 423 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 ADAMTSL2Q86TH1 951 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 NAXDQ8IW45 347 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 DCUN1D3Q8IWE4 304 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 GOLGA6L1Q8N7Z2 621 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 FBXO15Q8NCQ5 510 aaPredicted RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 KIAA1191Q96A73 305 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 CAMK1GQ96NX5 476 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 SLC12A9Q9BXP2 914 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 UNKQ9C0B0 810 aaKnown RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 TFB2MQ9H5Q4 396 aaKnown RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 PARVBQ9HBI1 364 aa15.37■□□□□ 0.05
USP40-206ENST00000443711 NOVA2Q9UNW9 492 aaKnown RBP15.37■□□□□ 0.05
USP40-206ENST00000443711 COL5A1P20908 1838 aaPredicted RBP15.36■□□□□ 0.05
USP40-206ENST00000443711 ZNF292O60281 2723 aa15.36■□□□□ 0.05
USP40-206ENST00000443711 NPEPPSL1A6NEC2 478 aa15.36■□□□□ 0.05
USP40-206ENST00000443711 ARHGEF33A8MVX0 844 aa15.36■□□□□ 0.05
USP40-206ENST00000443711 COPEO14579 308 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms