RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 LIFP15018 202 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 WT1P19544 449 aaPredicted RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 MAP4P27816 1152 aaKnown RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 RPL22P35268 128 aaKnown RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 MRPS25P82663 173 aaKnown RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 SARNPP82979 210 aaKnown RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 POU6F1Q14863 301 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 DUPD1Q68J44 220 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 PPP1R21Q6ZMI0 780 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 CEP128Q6ZU80 1094 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 SNX20Q7Z614 316 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 UNC5BQ8IZJ1 945 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 NXPE1Q8N323 547 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 DNAAF3Q8N9W5 541 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 OR2L2Q8NH16 312 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 HEXDCQ8WVB3 486 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 RNF31Q96EP0 1072 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 WWP1Q9H0M0 922 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 VPS37BQ9H9H4 285 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 MTRF1LQ9UGC7 380 aaKnown RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 NEU2Q9Y3R4 380 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 FAM87AP0C7U9 286 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 ZSCAN5DPP0CG00 497 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 MTHFD1P11586 935 aaKnown RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 ETS1P14921 441 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 ZNF140P52738 457 aaPredicted RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 SH3BP2P78314 561 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 XIAPP98170 497 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 MORF4L2Q15014 288 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 GPR33Q49SQ1 333 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 DENND5AQ6IQ26 1287 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 ARMC6Q6NXE6 501 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 ZNF449Q6P9G9 518 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 LINC00523Q86TU6 105 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 HOOK3Q86VS8 718 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 PPIL6Q8IXY8 311 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 EIF1ADQ8N9N8 165 aaKnown RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 GPR150Q8NGU9 434 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 DNAJC1Q96KC8 554 aaKnown RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 EFHD1Q9BUP0 239 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 TRIT1Q9H3H1 467 aaKnown RBP8.55□□□□□ -1.04
USP6NL-203ENST00000443016 HRASLS2Q9NWW9 162 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 LNPEPQ9UIQ6 1025 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 SNX24Q9Y343 169 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 COLEC10Q9Y6Z7 277 aa8.55□□□□□ -1.04
USP6NL-203ENST00000443016 TENM4Q6N022 2769 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 TMEM238LA0A1B0GVL6 79 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 UBA6A0AVT1 1052 aaPredicted RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 CCDC78A2IDD5 438 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 CTIFO43310 598 aaKnown RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 LDB2O43679 373 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 ERLIN1O75477 346 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 SEC31AO94979 1220 aaKnown RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 ATP1B2P14415 290 aaPredicted RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 EPB42P16452 691 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 TNFRSF8P28908 595 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 RPL21P46778 160 aaKnown RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 CDK16Q00536 496 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 NFATC3Q12968 1075 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 SEMA5AQ13591 1074 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 IL11RAQ14626 422 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 WDR93Q6P2C0 686 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 CYB5D1Q6P9G0 228 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 OOSP2Q86WS3 158 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 PPP1R3BQ86XI6 285 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 ESX1Q8N693 406 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 GLIS1Q8NBF1 620 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 IFT81Q8WYA0 676 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 SEC14L1Q92503 715 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 RELTQ969Z4 430 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 INSM2Q96T92 566 aaPredicted RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 TSPYL1Q9H0U9 437 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 ZNF768Q9H5H4 540 aaKnown RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 ANKZF1Q9H8Y5 726 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 PDE7BQ9NP56 450 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 EIF2B3Q9NR50 452 aaKnown RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 ARGLU1Q9NWB6 273 aaPredicted RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 EPHA6Q9UF33 1036 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 ANAPC5Q9UJX4 755 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 UQCRHLA0A096LP55 91 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 B8ZZF3 427 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 AKAP10O43572 662 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 AP2A1O95782 977 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 UQCRHP07919 91 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 PRKAR1AP10644 381 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 TPSB2P20231 275 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 PPP1CAP62136 330 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 PRKAA1Q13131 559 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 TPSAB1Q15661 275 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 BCL7AQ4VC05 210 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 KCTD11Q693B1 232 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 DUS1LQ6P1R4 473 aaKnown RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 TIPARPQ7Z3E1 657 aaKnown RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 PRSS42Q7Z5A4 293 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 SERPINA9Q86WD7 417 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 SIDT2Q8NBJ9 832 aaKnown RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 HM13Q8TCT9 377 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 STAMBPL1Q96FJ0 436 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 C19orf43Q9BQ61 176 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms