RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CROTQ9UKG9 612 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 ADAMTS6Q9UKP5 1117 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 TMPRSS11EQ9UL52 423 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 COQ6Q9Y2Z9 468 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 TIMM22Q9Y584 194 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 MTCH2Q9Y6C9 303 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 ZNF106Q9H2Y7 1883 aaKnown RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 SLC5A10A0PJK1 596 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 CACNB4O00305 520 aaPredicted RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 MANBAO00462 879 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 NR5A2O00482 541 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 MAN2B1O00754 1011 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 CFLARO15519 480 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 NRP2O60462 931 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 MATN4O95460 622 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 ITGAXP20702 1163 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 HNF4AP41235 474 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 SLC25A3Q00325 362 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 IRF8Q02556 426 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 EMX2Q04743 252 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 AGERQ15109 404 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 SKIV2LQ15477 1246 aaKnown RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 AAK1Q2M2I8 961 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 UGT3A2Q3SY77 523 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 TMEM198Q66K66 360 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 CAPN13Q6MZZ7 669 aaPredicted RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 AAGABQ6PD74 315 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 ATG14Q6ZNE5 492 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 ADGRG6Q86SQ4 1221 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 AMZ2Q86W34 360 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 SMRP1Q8NCR6 262 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 ASB12Q8WXK4 309 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 UBE2E3Q969T4 207 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 VOPP1Q96AW1 172 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 SIPA1Q96FS4 1042 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 ANKRD27Q96NW4 1050 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 MIPEPQ99797 713 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 GABRG3Q99928 467 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 DPEP2Q9H4A9 486 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 RNPEPL1Q9HAU8 725 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 AIG1Q9NVV5 245 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 GPRC5BQ9NZH0 403 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 CDH22Q9UJ99 828 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 LEF1Q9UJU2 399 aaPredicted RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 FZD4Q9ULV1 537 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 AP3M1Q9Y2T2 418 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 A0A1W2PP55 124 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 LRRC72A6NJI9 287 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 PEX11AO75192 247 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 PSIP1O75475 530 aaKnown RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 CA5AP35218 305 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 GNPDA1P46926 289 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 CTSCP53634 463 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 ERVPABLB-1P60509 514 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 PSME3P61289 254 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 FOXM1Q08050 763 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 TRAF3Q13114 568 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 SPATS1Q496A3 300 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 XKR7Q5GH72 579 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 PAGE2BQ5JRK9 111 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 LIPJQ5W064 366 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 PNCKQ6P2M8 343 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 DOK6Q6PKX4 331 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 CRTC3Q6UUV7 619 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 GK5Q6ZS86 529 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 USP30Q70CQ3 517 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 HEATR4Q86WZ0 1026 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 CFAP206Q8IYR0 622 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 BEND7Q8N7W2 519 aaPredicted RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 OR14C36Q8NHC7 312 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 SELENOMQ8WWX9 145 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 STARD8Q92502 1023 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 RAD51AP1Q96B01 352 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 MARK4Q96L34 752 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 TMEM79Q9BSE2 394 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 KCNE2Q9Y6J6 123 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 ATP6AP2A0A1C7CYW4 349 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 FAM234BA2RU67 622 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 GRXCR2A6NFK2 248 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 IGLON5A6NGN9 336 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 TRIM38O00635 465 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 TAPBPO15533 448 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 RNGTTO60942 597 aaKnown RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 SLC22A3O75751 556 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 ATP6AP2O75787 350 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 JUNP05412 331 aaKnown RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 SLC35G4P0C7Q5 338 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 PRPS2P11908 318 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 HSD3B1P14060 373 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 SLC2A4P14672 509 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 ME2P23368 584 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 HSD3B2P26439 372 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 SOX9P48436 509 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 CLNS1AP54105 237 aaKnown RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 LAPTM5Q13571 262 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 PTK2BQ14289 1009 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 PTCHD3Q3KNS1 767 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 C2orf27AQ580R0 203 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 SAMD4BQ5PRF9 694 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms