RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 OR2T11Q8NH01 316 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 ASB9Q96DX5 294 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 CDK15Q96Q40 435 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 CDRT15Q96T59 188 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 TACO1Q9BSH4 297 aaKnown RBP12.88□□□□□ -0.35
CPSF4-206ENST00000441580 TRMT61BQ9BVS5 477 aaKnown RBP12.88□□□□□ -0.35
CPSF4-206ENST00000441580 ACTR8Q9H981 624 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 S100A14Q9HCY8 104 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 PRSS16Q9NQE7 514 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 EPS15L1Q9UBC2 864 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 CROTQ9UKG9 612 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 PCDHGA7Q9Y5G6 932 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 LRRK1Q38SD2 2015 aa12.88□□□□□ -0.35
CPSF4-206ENST00000441580 SLC5A10A0PJK1 596 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 FAM234BA2RU67 622 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 LSM1O15116 133 aaKnown RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 NVLO15381 856 aaKnown RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 CFLARO15519 480 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 VEGFDO43915 354 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 SYNCRIPO60506 623 aaKnown RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 EEDO75530 441 aaKnown RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 CLDN9O95484 217 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 LAMP2P13473 410 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 ANPEPP15144 967 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 P2RY2P41231 377 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 CTSCP53634 463 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 PNLIPRP1P54315 467 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 SESN3P58005 492 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 TMEM115Q12893 351 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 ADAM15Q13444 863 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 IMPG1Q17R60 797 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 MUM1Q2TAK8 710 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 C6orf136Q5SQH8 315 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 C8orf82Q6P1X6 216 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 BLOC1S3Q6QNY0 202 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 ADAMTSL4Q6UY14 1074 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 MBOAT1Q6ZNC8 495 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 PRR23BQ6ZRT6 265 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 DHDDSQ86SQ9 333 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 VRK3Q8IV63 474 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 MMAAQ8IVH4 418 aaKnown RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 FUNDC1Q8IVP5 155 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 HM13Q8TCT9 377 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 USP7Q93009 1102 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 SPDL1Q96EA4 605 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 LINC00615Q96LM1 132 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 CCDC138Q96M89 665 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 ACOX2Q99424 681 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 ZBTB18Q99592 522 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 HOPXQ9BPY8 73 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 TRIM15Q9C019 465 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 MUC13Q9H3R2 512 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 ADA2Q9NZK5 511 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 KLQ9UEF7 1012 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 GIMAP2Q9UG22 337 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 LEF1Q9UJU2 399 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 SNX6Q9UNH7 406 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 EIF3LQ9Y262 564 aaKnown RBP12.87□□□□□ -0.35
CPSF4-206ENST00000441580 FADS3Q9Y5Q0 445 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 STON1Q9Y6Q2 735 aa12.87□□□□□ -0.35
CPSF4-206ENST00000441580 A0A1W2PP18 115 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 ARHGEF33A8MVX0 844 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 ARNTLO00327 626 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 MANBAO00462 879 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 INPP4BO15327 924 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 MAP3K7O43318 606 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 TBX10O75333 385 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 ULK1O75385 1050 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 SLC22A3O75751 556 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 BCAS2O75934 225 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-206ENST00000441580 RSL1D1O76021 490 aaKnown RBP12.86□□□□□ -0.35
CPSF4-206ENST00000441580 ACPPP15309 386 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 CAPN3P20807 821 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 C5AR1P21730 350 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 JAK1P23458 1154 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 TEAD1P28347 426 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 MAPK1P28482 360 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 TNFRSF4P43489 277 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 METAP1P53582 386 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 TRAP1Q12931 704 aaKnown RBP12.86□□□□□ -0.35
CPSF4-206ENST00000441580 PRKG2Q13237 762 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 CAMK2GQ13555 558 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-206ENST00000441580 CEACAM7Q14002 265 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 PIP5KL1Q5T9C9 394 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 ZNF776Q68DI1 518 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-206ENST00000441580 TRIM46Q7Z4K8 759 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 ZFAND4Q86XD8 727 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 TRAPPC5Q8IUR0 188 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 SFRP1Q8N474 314 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 DCBLD1Q8N8Z6 715 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 L3MBTL4Q8NA19 623 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 KCNV2Q8TDN2 545 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 CSGALNACT1Q8TDX6 532 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 SLC26A7Q8TE54 656 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 RSRC1Q96IZ7 334 aaKnown RBP12.86□□□□□ -0.35
CPSF4-206ENST00000441580 C1orf50Q9BV19 199 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 PLA2G2FQ9BZM2 168 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 RSPH9Q9H1X1 276 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-206ENST00000441580 LMCD1Q9NZU5 365 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms