RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 LMOD3Q0VAK6 560 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 PNRC1Q12796 327 aaPredicted RBP3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 HNRNPDQ14103 355 aaKnown RBP3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 PHLDA2Q53GA4 152 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 TMEM173Q86WV6 379 aaPredicted RBP3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 LINC00346Q8IVM7 164 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 AFAP1Q8N556 730 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 PPFIBP2Q8ND30 876 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 OR13J1Q8NGT2 312 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 OR2T6Q8NHC8 308 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 OLIG1Q8TAK6 271 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 GIMAP5Q96F15 307 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 CCDC34Q96HJ3 373 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 TREX2Q9BQ50 279 aaPredicted RBP3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 NUP85Q9BW27 656 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 WDR13Q9H1Z4 485 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 INTS9Q9NV88 658 aaKnown RBP3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 PYGO1Q9Y3Y4 419 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 DISP3Q9P2K9 1392 aa3.23□□□□□ -1.89
PGBD4P3-201ENST00000440731 ASTN2O75129 1339 aaPredicted RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 CLSPNQ9HAW4 1339 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 A0A1B0GU03 582 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 TSPAN1O60635 241 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 CDC123O75794 336 aaPredicted RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 PORP16435 677 aaPredicted RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 TRIM21P19474 475 aaKnown RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 EIF2DP41214 584 aaKnown RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 WNT5AP41221 380 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 SIRPAP78324 504 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 IRX1P78414 480 aaPredicted RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 GPR17Q13304 367 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 CUL4AQ13619 759 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 TAF13Q15543 124 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 MEA1Q16626 185 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 GRTP1Q5TC63 336 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 ZC2HC1BQ5TFG8 222 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 DHRS7BQ6IAN0 325 aaPredicted RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 TMEM211Q6ICI0 200 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 PWWP2BQ6NUJ5 590 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 TMPRSS11FQ6ZWK6 438 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 CEP57Q86XR8 500 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 TMEM139Q8IV31 216 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 ARHGAP24Q8N264 748 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 GRHL3Q8TE85 626 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 SUSD6Q92537 303 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 LPGAT1Q92604 370 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 ZNF653Q96CK0 615 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 MAGED4Q96JG8 741 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 NEK1Q96PY6 1258 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 URM1Q9BTM9 101 aaKnown RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 LMF2Q9BU23 707 aaKnown RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 MXD3Q9BW11 206 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 VN1R1Q9GZP7 353 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 OPA3Q9H6K4 179 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 ZNF71Q9NQZ8 489 aaPredicted RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 PSD3Q9NYI0 1048 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 WSB2Q9NYS7 404 aaPredicted RBP3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 CACNG4Q9UBN1 327 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 RASAL2Q9UJF2 1139 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 OSGIN1Q9UJX0 560 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 TMEM5Q9Y2B1 443 aa3.22□□□□□ -1.89
PGBD4P3-201ENST00000440731 ZNF644Q9H582 1327 aaPredicted RBP3.21□□□□□ -1.89
PGBD4P3-201ENST00000440731 IGHV4-61A0A0C4DH41 118 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 LOC101059948A0A1B0GTJ6 334 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 ANKUB1A6NFN9 424 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 PRR32B1ATL7 298 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 ENTPD3O75355 529 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 PRKRAO75569 313 aaKnown RBP3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 NADKO95544 446 aaPredicted RBP3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 IGHV4-59P01825 116 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 RAF1P04049 648 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 CLK1P49759 484 aaKnown RBP3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 CDH13P55290 713 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 P2RY6Q15077 328 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 HYIQ5T013 277 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 KRTAP7-1Q8IUC3 87 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 EID3Q8N140 333 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 TRIML1Q8N9V2 468 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 OR4C3Q8NH37 302 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 MRGPRDQ8TDS7 321 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 IRGQQ8WZA9 623 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 PTERQ96BW5 349 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 NSUN4Q96CB9 384 aaKnown RBP3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 WBP1Q96G27 269 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 GMPPAQ96IJ6 420 aaPredicted RBP3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 RSRC1Q96IZ7 334 aaKnown RBP3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 ZNF599Q96NL3 588 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 OLFM1Q99784 485 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 TEX12Q9BXU0 123 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 MMP27Q9H306 513 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 PDE7BQ9NP56 450 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 PLCXD1Q9NUJ7 323 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 ATAD3AQ9NVI7 634 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 MRPL15Q9P015 296 aaKnown RBP3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 TUBE1Q9UJT0 475 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 MTUS1Q9ULD2 1270 aa3.21□□□□□ -1.9
PGBD4P3-201ENST00000440731 SOS1Q07889 1333 aaPredicted RBP3.2□□□□□ -1.9
PGBD4P3-201ENST00000440731 IGHV4-4A0A075B6R2 117 aa3.2□□□□□ -1.9
PGBD4P3-201ENST00000440731 A0A087X002 238 aa3.2□□□□□ -1.9
PGBD4P3-201ENST00000440731 MEIOCA2RUB1 952 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms